iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017634

Ensembl Protein ID

Bra018781.1-P

UniProt Accession

M4DQI8; M4DQI8_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra018781	Bra018781.1	Bra018781.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.40e-08	35.4	126	168

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           CaiCl++f   ++ +++lp C H fh  C+ kw       s + +CP+Cr
   Q: 126  CAICLSEFvseER-VKLLPtCHHGFHVRCIDKW------LSSHSSCPTCR 168
           ********99555.*******************......**********8 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MSTSMSVPTM KQTQIFQDIL RSSYARRLLL DQSPSPAPSP YADDTNFDAN VVMVLSVLLC 60
ALVCSLGLNS VIRCALRCSS LAPSEAGDNQ PAARLSNTGV KRKALKSFQT VSYSADLNLP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCAACTT CCATGTCTGT TCCCACCATG AAACAAACTC AGATCTTTCA AGATATTCTT 60
CGAAGTTCTT ACGCAAGAAG ATTACTACTT GATCAGTCAC CAAGTCCAGC ACCGTCCCCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002440	Amborella trichopoda	53.38	1.00e-32	132.00
IUUC-Ath-006920	Arabidopsis thaliana	83.09	3.00e-89	320.00
IUUC-Bol-016181	Brassica oleracea	99.53	8.00e-108	382.00
IUUC-Mtr-058186	Medicago truncatula	60.33	9.00e-57	213.00
IUUC-Mac-065335	Musa acuminata	47.94	6.00e-40	156.00
IUUC-Smo-109254	Selaginella moellendorffii	41.73	2.00e-24	104.00
IUUC-Sit-110398	Setaria italica	51.53	4.00e-32	130.00
IUUC-Sly-111257	Solanum lycopersicum	52.63	9.00e-45	172.00
IUUC-Stu-112198	Solanum tuberosum	51.83	3.00e-57	214.00
IUUC-Sbi-114701	Sorghum bicolor	49.12	8.00e-31	126.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence