iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121445

Ensembl Protein ID

EOY19197

UniProt Accession

A0A061FRE6; A0A061FRE6_THECC

Genbank Protein ID

EOY19196.1; EOY19197.1

Protein Name

RING/U-box superfamily protein isoform 1

Genbank Nucleotide ID

CM001888; CM001888

Gene Name

TCM_044140

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_044140	EOY19197	EOY19197

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	6.40e-08	33.9	87	129

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C +Cl+++  +d +++lp CgH fh +C+  w       +++ +CP+Cr
   Q: 87   CTVCLSEYhsEDVLRILPyCGHSFHITCIDIW------LQQHSTCPVCR 129
           99****9988888999****************......**********8 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MISAGINLVM TVIGFTVSTM FIVFVCTRLV CARIQLNASR RSFPVASRSD LSILERGFHG 60
LEPVVVANFP TKKYSDECFL ATEDAQCTVC LSEYHSEDVL RILPYCGHSF HITCIDIWLQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACAGCAACCG ATTCTATCTG GATCAGCTTC AGTTTGCCTT CGCTTTGGTC CGAGTGTAGC 60
AATTACACTT AAATTTAGAT CTATAATCTC TCTTACAAAT CTATCTTACA AATCTCCCTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000131	Aegilops tauschii	53.57	5.00e-25	107.00
IUUC-Atr-002798	Amborella trichopoda	58.77	4.00e-70	256.00
IUUC-Bdi-014707	Brachypodium distachyon	36.92	1.00e-31	129.00
IUUC-Gma-043344	Glycine max	67.84	4.00e-91	326.00
IUUC-Lpe-050686	Leersia perrieri	43.59	1.00e-33	135.00
IUUC-Mtr-058009	Medicago truncatula	62.72	1.00e-80	291.00
IUUC-Mac-065561	Musa acuminata	65.48	2.00e-61	228.00
IUUC-Ogl-077876	Oryza glaberrima	41.67	6.00e-32	129.00
IUUC-Ogu-078546	Oryza glumaepatula	48.89	4.00e-33	134.00
IUUC-Opu-083989	Oryza punctata	43.98	5.00e-37	147.00
IUUC-Ppa-095233	Physcomitrella patens	38.52	1.00e-18	86.30
IUUC-Pop-099967	Populus trichocarpa	71.49	8.00e-90	322.00
IUUC-Ppe-101855	Prunus persica	75.44	3.00e-100	356.00
IUUC-Sit-110584	Setaria italica	53.00	6.00e-27	113.00
IUUC-Sly-110875	Solanum lycopersicum	64.19	4.00e-73	266.00
IUUC-Stu-112465	Solanum tuberosum	65.07	3.00e-74	270.00
IUUC-Sbi-114099	Sorghum bicolor	50.00	3.00e-28	117.00
IUUC-Tae-125846	Triticum aestivum	45.13	9.00e-23	99.80
IUUC-Vvi-131455	Vitis vinifera	75.12	4.00e-93	332.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence