iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bdi-014908

Ensembl Protein ID

BRADI1G05190.1

UniProt Accession

I1GM42; I1GM42_BRADI

Genbank Protein ID

KQK12658.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000880

Gene Name

LOC100830872; BRADI_1g05190

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI1G05190	BRADI1G05190.1	BRADI1G05190.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.00e-06	29.4	181	200

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 13   d.tllvsGsdDgtikvWDlr 31
           d  +lvs s Dg+ ++W l+
   Q: 181  DsEFLVSTSTDGSARIWKLD 200
           4589*************986 PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MAGGGGGQVP SSMLVGKVTC GAWIRRRDGG AAASRLLVLY GRAAAASSPP LLDLLAFDAS 60
KSALASEEPL LRVVMGEDGA DAPRAIAVHP GGDEFVCATA KGCRLFKLVY EEFSINLISR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGGGCG GCGGCGGCGG CCAGGTTCCC TCCTCGATGT TGGTCGGGAA GGTGACCTGT 60
GGGGCGTGGA TACGGCGGCG GGACGGGGGG GCGGCGGCCA GCCGCCTCCT CGTGCTGTAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0030176--C:integral component of endoplasmic reticulum membrane
GO:0005096--F:GTPase activator activity
GO:0051020--F:GTPase binding
GO:0005090--F:Sar guanyl-nucleotide exchange factor activity
GO:0009306--P:protein secretion
GO:0003400--P:regulation of COPII vesicle coating

KEGG

bdi:100830872

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000155	Aegilops tauschii	67.25	5.00e-133	466.00
IUUC-Atr-002477	Amborella trichopoda	55.11	6.00e-110	389.00
IUUC-Cel-018480	Caenorhabditis elegans	28.84	9.00e-11	60.50
IUUC-Gma-042654	Glycine max	56.41	6.00e-114	403.00
IUUC-Mtr-058623	Medicago truncatula	54.11	3.00e-110	390.00
IUUC-Oba-075552	Oryza barthii	74.00	6.00e-157	545.00
IUUC-Ogl-077345	Oryza glaberrima	74.00	6.00e-157	546.00
IUUC-Ogu-078334	Oryza glumaepatula	74.00	6.00e-157	545.00
IUUC-Oin-079600	Oryza indica	74.00	9.00e-157	545.00
IUUC-Olo-080918	Oryza longistaminata	74.29	3.00e-157	547.00
IUUC-Ome-081986	Oryza meridionalis	74.29	6.00e-157	545.00
IUUC-Oni-082430	Oryza nivara	73.75	3.00e-132	463.00
IUUC-Opu-083902	Oryza punctata	77.21	6.00e-163	565.00
IUUC-Oru-084937	Oryza rufipogon	74.09	9.00e-133	465.00
IUUC-Osa-085881	Oryza sativa	74.00	9.00e-157	545.00
IUUC-Ppa-095590	Physcomitrella patens	36.39	2.00e-60	225.00
IUUC-Pop-099307	Populus trichocarpa	58.57	5.00e-116	410.00
IUUC-Ppe-101362	Prunus persica	54.25	3.00e-106	377.00
IUUC-Smo-108754	Selaginella moellendorffii	41.52	1.00e-55	208.00
IUUC-Sly-110920	Solanum lycopersicum	55.01	9.00e-101	359.00
IUUC-Stu-112065	Solanum tuberosum	54.73	2.00e-100	358.00
IUUC-Tca-121608	Theobroma cacao	57.42	2.00e-117	415.00
IUUC-Tae-125804	Triticum aestivum	81.57	7.00e-174	602.00
IUUC-Tur-126597	Triticum urartu	72.80	2.00e-106	377.00
IUUC-Vvi-131686	Vitis vinifera	60.33	2.00e-106	377.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence