iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Olo-080735

Ensembl Protein ID

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
KN541339.1_FG001	KN541339.1_FGT001	KN541339.1_FGP001

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	1.10e-10	42.1	468	508

Domain Profile

E3 activity/RING/PHD

   S: 3    vClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCr 52
            C  Cg+gg+    +  C+ C + fHpaC++ls    +p++  w+C +C+
   Q: 468  LCRECGQGGD----IFPCKMCPRSFHPACVGLS---GVPSE--WYCDNCS 508
           5666666666....9******************...99*99..******7 PP

Organism

Oryza longistaminata

Protein Sequence
(Fasta)

MDAEAPKPIH LLNDKDKEGD DGSHQDTATL QSPPHGSDAH PIPMELNVSA AVARPPQPPH 60
AQPTELNAVA AAASALPMEL DAAAAVPAES TELNAAATTV PAQPTEVNAA TEIVKPIGLN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGACGCCG AGGCGCCCAA GCCCATACAC CTCCTCAACG ACAAGGACAA GGAGGGGGAC 60
GATGGATCTC ACCAGGATAC AGCCACGCTA CAGTCACCCC CTCATGGATC TGATGCTCAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006555	Arabidopsis lyrata	41.77	1.00e-83	303.00
IUUC-Ath-007103	Arabidopsis thaliana	47.13	4.00e-103	369.00
IUUC-Bol-015801	Brassica oleracea	46.62	1.00e-101	363.00
IUUC-Bra-017395	Brassica rapa	46.63	8.00e-100	357.00
IUUC-Gma-043986	Glycine max	48.98	7.00e-109	386.00
IUUC-Hvu-047802	Hordeum vulgare	80.30	0.00e+00	670.00
IUUC-Lpe-050827	Leersia perrieri	52.60	1.00e-117	416.00
IUUC-Mtr-058688	Medicago truncatula	43.91	2.00e-92	333.00
IUUC-Mac-064830	Musa acuminata	60.05	5.00e-137	480.00
IUUC-Oba-075837	Oryza barthii	78.79	0.00e+00	1234.00
IUUC-Obr-076448	Oryza brachyantha	90.62	0.00e+00	760.00
IUUC-Ogu-078244	Oryza glumaepatula	92.07	0.00e+00	769.00
IUUC-Oin-079045	Oryza indica	89.17	0.00e+00	690.00
IUUC-Ome-081425	Oryza meridionalis	91.67	0.00e+00	773.00
IUUC-Oni-082279	Oryza nivara	78.87	0.00e+00	1249.00
IUUC-Opu-083459	Oryza punctata	75.33	0.00e+00	1220.00
IUUC-Oru-085169	Oryza rufipogon	92.31	0.00e+00	772.00
IUUC-Osa-085819	Oryza sativa	92.31	0.00e+00	772.00
IUUC-Pop-099875	Populus trichocarpa	50.23	1.00e-119	422.00
IUUC-Ppe-101775	Prunus persica	52.63	5.00e-120	424.00
IUUC-Sit-109839	Setaria italica	81.23	0.00e+00	677.00
IUUC-Sly-111378	Solanum lycopersicum	51.74	2.00e-121	429.00
IUUC-Stu-112427	Solanum tuberosum	51.49	3.00e-120	425.00
IUUC-Tca-121314	Theobroma cacao	39.60	5.00e-116	411.00
IUUC-Tae-124462	Triticum aestivum	86.47	7.00e-158	550.00
IUUC-Tur-126190	Triticum urartu	52.21	0.00e+00	653.00
IUUC-Vvi-131561	Vitis vinifera	45.70	7.00e-110	390.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence