iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.6__2258__AT5G22750.1	fgenesh2_kg.6__2258__AT5G22750.1	fgenesh2_kg.6__2258__AT5G22750.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	8.50e-08	33.3	794	834

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadCl.qkwpglknssskefrCPlCr 46
           C+iCle f+d  +++pC H  +++Cl   w       s++ +CP+Cr
   Q: 794  CPICLEAFED-AVLTPCAHRLCRECLlASW-----RNSNTGLCPVCR 834
           **********.888***********98999.....4666667****8 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MGTKVSDDLV STVRSVVGSD YSDMDIIRAL HMSNRDPTAA INIIFDTPSF GKPDVATPIP 60
SGSNGGKRVE NRIKGCSFGD SASVGVTHLV EEEDESVNGG GEESVSGNEW WFVGCSELGG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGGAGTTTGA GAGACTCGTC GCTAATTTAC GCGCGTTTCT CGGTTCCGGC AGATTTCGTA 60
CGCCGTCGTC GATCTGCTTC AATTTCTAGT TCGCTCTGTT CATTGGGTTT TTCTTGTTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR014001--Helicase_ATP-bd
IPR001650--Helicase_C
IPR014905--HIRAN
IPR027417--P-loop_NTPase
IPR000330--SNF2_N
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS51192--HELICASE_ATP_BIND_1
PS51194--HELICASE_CTER
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00271--Helicase_C
PF08797--HIRAN
PF00176--SNF2_N

SMART

SM00487--DEXDc
SM00490--HELICc
SM00910--HIRAN
SM00184--RING

Gene Ontology

GO:0005524--F:ATP binding
GO:0016818--F:hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
GO:0003676--F:nucleic acid binding
GO:0008270--F:zinc ion binding
GO:0009294--P:DNA mediated transformation
GO:0045003--P:double-strand break repair via synthesis-dependent strand annealing

KEGG

aly:ARALYDRAFT_489124

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003139	Amborella trichopoda	65.66	0.00e+00	1399.00
IUUC-Apl-003679	Anas platyrhynchos	33.60	3.00e-45	176.00
IUUC-Ath-007517	Arabidopsis thaliana	96.50	0.00e+00	1978.00
IUUC-Ago-007997	Ashbya gossypii	29.47	2.00e-101	363.00
IUUC-Afu-009055	Aspergillus fumigatus	31.47	2.00e-133	470.00
IUUC-Bgr-012147	Blumeria graminis	33.80	1.00e-136	480.00
IUUC-Bci-013741	Botrytis cinerea	33.37	5.00e-142	498.00
IUUC-Bdi-014646	Brachypodium distachyon	63.45	0.00e+00	1309.00
IUUC-Bol-015484	Brassica oleracea	85.22	0.00e+00	1724.00
IUUC-Bra-016925	Brassica rapa	85.36	0.00e+00	1754.00
IUUC-Cre-022824	Chlamydomonas reinhardtii	27.46	3.00e-59	223.00
IUUC-Csv-026168	Ciona savignyi	27.76	1.00e-59	223.00
IUUC-Cgl-026606	Colletotrichum gloeosporioides	37.57	5.00e-138	484.00
IUUC-Cme-027110	Cyanidioschyzon merolae	38.41	2.00e-130	459.00
IUUC-Eeu-034597	Erinaceus europaeus	32.44	4.00e-64	239.00
IUUC-Fal-037486	Ficedula albicollis	33.02	7.00e-76	278.00
IUUC-Fso-038179	Fusarium solani	33.63	8.00e-147	514.00
IUUC-Ggr-039735	Gaeumannomyces graminis	34.22	2.00e-134	473.00
IUUC-Gga-040472	Gallus gallus	32.01	6.00e-72	265.00
IUUC-Gma-042995	Glycine max	70.61	0.00e+00	1484.00
IUUC-Hvu-047495	Hordeum vulgare	64.21	0.00e+00	1068.00
IUUC-Kpa-049087	Komagataella pastoris	30.41	4.00e-105	375.00
IUUC-Lpe-051584	Leersia perrieri	62.60	0.00e+00	1208.00
IUUC-Mor-057210	Magnaporthe oryzae	33.48	1.00e-139	489.00
IUUC-Mpo-057407	Magnaporthe poae	33.53	4.00e-142	498.00
IUUC-Mtr-058565	Medicago truncatula	67.08	0.00e+00	1398.00
IUUC-Mla-058867	Melampsora laricipopulina	28.71	2.00e-73	270.00
IUUC-Mga-059553	Meleagris gallopavo	32.71	3.00e-44	173.00
IUUC-Mvi-060322	Microbotryum violaceum	33.15	4.00e-92	332.00
IUUC-Mac-065174	Musa acuminata	56.79	0.00e+00	688.00
IUUC-Nfi-068354	Neosartorya fischeri	31.20	1.00e-133	470.00
IUUC-Ncr-068844	Neurospora crassa	32.19	7.00e-135	474.00
IUUC-Oba-075937	Oryza barthii	66.20	0.00e+00	1191.00
IUUC-Obr-076403	Oryza brachyantha	65.31	0.00e+00	1263.00
IUUC-Ogl-077573	Oryza glaberrima	64.83	0.00e+00	1323.00
IUUC-Ogu-077957	Oryza glumaepatula	66.20	0.00e+00	1201.00
IUUC-Oin-079146	Oryza indica	69.97	0.00e+00	1298.00
IUUC-Olo-080437	Oryza longistaminata	59.04	0.00e+00	1032.00
IUUC-Ome-081448	Oryza meridionalis	64.03	0.00e+00	1269.00
IUUC-Oni-082389	Oryza nivara	65.61	0.00e+00	1178.00
IUUC-Opu-083322	Oryza punctata	67.56	0.00e+00	1212.00
IUUC-Oru-085066	Oryza rufipogon	65.98	0.00e+00	1202.00
IUUC-Osa-085686	Oryza sativa	71.50	0.00e+00	1177.00
IUUC-Pno-094916	Phaeosphaeria nodorum	34.40	2.00e-134	473.00
IUUC-Ppa-095877	Physcomitrella patens	57.14	0.00e+00	1055.00
IUUC-Pop-099320	Populus trichocarpa	72.20	0.00e+00	1495.00
IUUC-Ppe-101820	Prunus persica	71.79	0.00e+00	1483.00
IUUC-Ptt-103829	Puccinia triticina	28.70	2.00e-98	353.00
IUUC-Smo-108977	Selaginella moellendorffii	72.04	2.00e-161	561.00
IUUC-Sit-110076	Setaria italica	69.12	0.00e+00	1261.00
IUUC-Sly-111908	Solanum lycopersicum	68.80	0.00e+00	1457.00
IUUC-Sbi-113927	Sorghum bicolor	63.78	0.00e+00	1291.00
IUUC-Sre-115131	Sporisorium reilianum	32.02	1.00e-128	453.00
IUUC-Tru-117768	Takifugu rubripes	41.08	2.00e-106	379.00
IUUC-Tca-121137	Theobroma cacao	73.22	0.00e+00	1550.00
IUUC-Tre-121896	Trichoderma reesei	33.64	2.00e-143	503.00
IUUC-Tvi-122597	Trichoderma virens	33.58	2.00e-142	499.00
IUUC-Tae-124722	Triticum aestivum	68.19	0.00e+00	1279.00
IUUC-Tur-126433	Triticum urartu	67.17	0.00e+00	985.00
IUUC-Tme-126953	Tuber melanosporum	32.26	1.00e-133	470.00
IUUC-Tbe-127642	Tupaia belangeri	38.46	7.00e-45	175.00
IUUC-Uma-129629	Ustilago maydis	30.73	7.00e-126	444.00
IUUC-Vvi-130943	Vitis vinifera	71.00	0.00e+00	1514.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence