iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Cre-022824

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Predicted protein

Genbank Nucleotide ID

DS496154

Gene Name

CHLREDRAFT_152316

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
CHLREDRAFT_152316	EDO98655	EDO98655

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	5.90e-08	32.7	1219	1259
E3 activity/RING/U-box	3.70e-06	26.5	1218	1264

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iC + ++  p+v+pC H f+++C+  w     ++s++ +CP Cr
   Q: 1219 CPICVDAMDG-PVVTPCSHWFCRECITGW----LNQSPHHSCPSCR 1259
           ****999966.99****************....88**********8 PP

E3 activity/RING/U-box

   S: 7    lCpIslelMrdPvvlpsGitydrssIekwlasggk.tcPvtrqplte 52
            CpI  + M  Pvv+p+ + + r++I  wl+++ + +cP +rq ++ 
   Q: 1218 ECPICVDAMDGPVVTPCSHWFCRECITGWLNQSPHhSCPSCRQVISV 1264
           5*****************************666555******98765 PP

Organism

Chlamydomonas reinhardtii

Protein Sequence
(Fasta)

MGAGAAGTAA GTAAAGAAGG AAARPGAAGA EAAGPSNTAA VVEAQARRQG RLQAAAALDN 60
AFNQLANTLN GRRPDAAAAP AAAAAAAAAA AAAGAAAAAA PPAAPGAGTG PSTAAAGAAG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGCGCTG GCGCGGCCGG CACGGCGGCG GGCACAGCGG CGGCAGGGGC GGCGGGCGGG 60
GCCGCTGCGC GACCCGGGGC GGCGGGTGCT GAGGCTGCAG GCCCCAGCAA CACGGCAGCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR014001--Helicase_ATP-bd
IPR001650--Helicase_C
IPR027417--P-loop_NTPase
IPR000330--SNF2_N
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS51192--HELICASE_ATP_BIND_1
PS51194--HELICASE_CTER
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00271--Helicase_C
PF00176--SNF2_N
PF13639--zf-RING_2

SMART

SM00487--DEXDc
SM00490--HELICc
SM00184--RING

Gene Ontology

GO:0005524--F:ATP binding
GO:0008270--F:zinc ion binding

KEGG

cre:CHLREDRAFT_152316

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000449	Aegilops tauschii	26.47	2.00e-40	159.00
IUUC-Aml-001237	Ailuropoda melanoleuca	30.43	6.00e-63	234.00
IUUC-Atr-003139	Amborella trichopoda	29.87	6.00e-65	240.00
IUUC-Apl-003679	Anas platyrhynchos	37.32	6.00e-25	108.00
IUUC-Aca-004994	Anolis carolinensis	35.00	3.00e-37	149.00
IUUC-Aly-006331	Arabidopsis lyrata	27.61	2.00e-59	222.00
IUUC-Ath-007517	Arabidopsis thaliana	27.61	6.00e-60	224.00
IUUC-Ago-007997	Ashbya gossypii	24.44	4.00e-41	161.00
IUUC-Acl-008053	Aspergillus clavatus	27.92	8.00e-54	203.00
IUUC-Afl-008458	Aspergillus flavus	27.44	8.00e-31	127.00
IUUC-Afu-008767	Aspergillus fumigatus	28.71	2.00e-58	219.00
IUUC-Ani-009340	Aspergillus nidulans	29.39	3.00e-30	125.00
IUUC-Ang-009874	Aspergillus niger	25.93	6.00e-51	193.00
IUUC-Aor-010130	Aspergillus oryzae	29.48	3.00e-59	221.00
IUUC-Ate-010469	Aspergillus terreus	29.78	4.00e-36	145.00
IUUC-Ame-011743	Astyanax mexicanus	30.78	1.00e-52	200.00
IUUC-Bgr-012253	Blumeria graminis	26.05	1.00e-55	210.00
IUUC-Bta-013391	Bos taurus	30.07	1.00e-68	253.00
IUUC-Bci-013956	Botrytis cinerea	25.67	5.00e-48	184.00
IUUC-Bdi-014267	Brachypodium distachyon	30.51	1.00e-63	236.00
IUUC-Bol-015995	Brassica oleracea	28.02	3.00e-63	235.00
IUUC-Bra-016925	Brassica rapa	27.29	5.00e-61	228.00
IUUC-Cja-019685	Callithrix jacchus	30.07	3.00e-67	248.00
IUUC-Cfa-020485	Canis familiaris	30.43	3.00e-62	231.00
IUUC-Cpo-021361	Cavia porcellus	30.74	2.00e-62	231.00
IUUC-Csa-023894	Chlorocebus sabaeus	30.07	2.00e-67	249.00
IUUC-Cho-024891	Choloepus hoffmanni	29.02	4.00e-41	161.00
IUUC-Csv-026168	Ciona savignyi	27.50	3.00e-23	102.00
IUUC-Cgl-026695	Colletotrichum gloeosporioides	28.02	1.00e-32	133.00
IUUC-Cne-026886	Cryptococcus neoformans	30.33	9.00e-69	253.00
IUUC-Cme-027110	Cyanidioschyzon merolae	28.63	3.00e-55	208.00
IUUC-Dre-027867	Danio rerio	29.93	2.00e-62	232.00
IUUC-Dno-029517	Dasypus novemcinctus	30.43	3.00e-64	238.00
IUUC-Dor-030590	Dipodomys ordii	30.89	9.00e-25	107.00
IUUC-Dse-031564	Dothistroma septosporum	27.36	6.00e-37	146.00
IUUC-Dme-031815	Drosophila melanogaster	30.00	2.00e-25	109.00
IUUC-Ete-032421	Echinops telfairi	28.85	2.00e-31	129.00
IUUC-Eca-034058	Equus caballus	29.89	1.00e-60	226.00
IUUC-Eeu-034597	Erinaceus europaeus	32.08	5.00e-29	121.00
IUUC-Fca-035390	Felis catus	30.43	5.00e-63	234.00
IUUC-Fal-037486	Ficedula albicollis	34.48	3.00e-25	109.00
IUUC-Fox-037751	Fusarium oxysporum	27.68	3.00e-53	201.00
IUUC-Fso-038179	Fusarium solani	28.57	4.00e-57	214.00
IUUC-Gmo-038544	Gadus morhua	32.01	1.00e-65	243.00
IUUC-Ggr-040094	Gaeumannomyces graminis	28.21	3.00e-30	125.00
IUUC-Gga-040472	Gallus gallus	37.32	4.00e-25	108.00
IUUC-Gac-042401	Gasterosteus aculeatus	31.70	4.00e-65	241.00
IUUC-Gma-042995	Glycine max	27.42	1.00e-63	236.00
IUUC-Ggo-045628	Gorilla gorilla	30.07	2.00e-67	248.00
IUUC-Hsa-045930	Homo sapiens	30.07	2.00e-67	249.00
IUUC-Hvu-047660	Hordeum vulgare	26.47	4.00e-40	157.00
IUUC-Itr-048493	Ictidomys tridecemlineatus	30.56	3.00e-67	248.00
IUUC-Kpa-049087	Komagataella pastoris	26.16	1.00e-48	186.00
IUUC-Lch-050617	Latimeria chalumnae	30.20	2.00e-65	242.00
IUUC-Lpe-051724	Leersia perrieri	31.02	3.00e-66	244.00
IUUC-Loc-052785	Lepisosteus oculatus	31.28	2.00e-69	256.00
IUUC-Lma-052956	Leptosphaeria maculans	29.64	2.00e-57	216.00
IUUC-Laf-054309	Loxodonta africana	30.07	3.00e-61	228.00
IUUC-Mcc-055493	Macaca mulatta	30.43	1.00e-67	249.00
IUUC-Meu-056270	Macropus eugenii	35.00	8.00e-37	147.00
IUUC-Mor-056943	Magnaporthe oryzae	26.98	1.00e-47	182.00
IUUC-Mpo-057611	Magnaporthe poae	28.21	6.00e-30	124.00
IUUC-Mtr-058172	Medicago truncatula	29.52	1.00e-63	236.00
IUUC-Mla-058867	Melampsora laricipopulina	26.57	2.00e-29	122.00
IUUC-Mga-059553	Meleagris gallopavo	36.62	3.00e-24	105.00
IUUC-Mvi-060400	Microbotryum violaceum	26.48	3.00e-58	218.00
IUUC-Mmr-061043	Microcebus murinus	31.88	1.00e-63	236.00
IUUC-Mdo-062919	Monodelphis domestica	34.58	6.00e-36	144.00
IUUC-Mmu-064338	Mus musculus	29.35	5.00e-67	248.00
IUUC-Mac-065666	Musa acuminata	29.08	3.00e-56	211.00
IUUC-Mpu-066781	Mustela putorius furo	30.20	6.00e-63	234.00
IUUC-Mlu-068076	Myotis lucifugus	30.98	9.00e-64	236.00
IUUC-Nfi-068386	Neosartorya fischeri	28.15	2.00e-55	209.00
IUUC-Ncr-068844	Neurospora crassa	26.38	4.00e-54	205.00
IUUC-Nle-069947	Nomascus leucogenys	30.07	2.00e-67	249.00
IUUC-Opr-070388	Ochotona princeps	35.42	3.00e-36	145.00
IUUC-Ont-071782	Oreochromis niloticus	32.01	9.00e-66	243.00
IUUC-Oan-073331	Ornithorhynchus anatinus	35.27	6.00e-37	147.00
IUUC-Ocu-074705	Oryctolagus cuniculus	30.43	2.00e-68	252.00
IUUC-Oba-075881	Oryza barthii	30.93	2.00e-67	248.00
IUUC-Obr-076344	Oryza brachyantha	29.61	2.00e-59	221.00
IUUC-Ogl-076957	Oryza glaberrima	30.93	2.00e-67	248.00
IUUC-Ogu-078648	Oryza glumaepatula	29.95	2.00e-61	228.00
IUUC-Oin-079449	Oryza indica	29.95	1.00e-62	233.00
IUUC-Olo-080721	Oryza longistaminata	29.95	6.00e-63	233.00
IUUC-Ome-081579	Oryza meridionalis	29.98	3.00e-62	231.00
IUUC-Oni-083054	Oryza nivara	29.95	1.00e-62	233.00
IUUC-Opu-083706	Oryza punctata	30.71	6.00e-64	237.00
IUUC-Oru-085259	Oryza rufipogon	29.95	4.00e-63	234.00
IUUC-Osa-085568	Oryza sativa	29.58	7.00e-59	220.00
IUUC-Ola-086830	Oryzias latipes	30.45	4.00e-59	221.00
IUUC-Olu-087669	Ostreococcus lucimarinus	25.52	1.00e-37	150.00
IUUC-Oga-088120	Otolemur garnettii	31.16	1.00e-58	220.00
IUUC-Oar-089293	Ovis aries	30.07	2.00e-68	252.00
IUUC-Ptr-091418	Pan troglodytes	30.07	2.00e-67	248.00
IUUC-Pan-092579	Papio anubis	26.89	2.00e-31	129.00
IUUC-Psi-093626	Pelodiscus sinensis	29.89	4.00e-67	248.00
IUUC-Pma-094750	Petromyzon marinus	32.50	1.00e-27	114.00
IUUC-Pno-094916	Phaeosphaeria nodorum	28.88	1.00e-59	223.00
IUUC-Ppa-095877	Physcomitrella patens	30.19	3.00e-67	248.00
IUUC-Pfo-096540	Poecilia formosa	32.26	3.00e-68	251.00
IUUC-Pab-098010	Pongo abelii	29.89	6.00e-67	247.00
IUUC-Pop-099320	Populus trichocarpa	28.34	4.00e-64	238.00
IUUC-Pca-100648	Procavia capensis	28.80	6.00e-64	237.00
IUUC-Ppe-102077	Prunus persica	29.24	1.00e-58	219.00
IUUC-Pva-102896	Pteropus vampyrus	30.10	1.00e-57	216.00
IUUC-Pgr-103454	Puccinia graminis	24.42	2.00e-43	169.00
IUUC-Ptt-103966	Puccinia triticina	32.27	1.00e-36	146.00
IUUC-Pte-104242	Pyrenophora teres	28.74	2.00e-57	216.00
IUUC-Pyt-104793	Pyrenophora triticirepentis	25.58	3.00e-31	129.00
IUUC-Rno-106130	Rattus norvegicus	30.07	1.00e-68	253.00
IUUC-Sce-106396	Saccharomyces cerevisiae	24.74	6.00e-42	164.00
IUUC-Sha-107221	Sarcophilus harrisii	35.00	5.00e-37	148.00
IUUC-Sja-107672	Schizosaccharomyces japonicus	28.12	8.00e-57	214.00
IUUC-Spo-108026	Schizosaccharomyces pombe	25.00	6.00e-64	237.00
IUUC-Ssl-108383	Sclerotinia sclerotiorum	26.27	3.00e-50	192.00
IUUC-Smo-109629	Selaginella moellendorffii	29.33	4.00e-69	254.00
IUUC-Sit-109770	Setaria italica	28.05	1.00e-60	226.00
IUUC-Sly-111908	Solanum lycopersicum	28.57	6.00e-63	234.00
IUUC-Stu-112600	Solanum tuberosum	27.18	9.00e-60	223.00
IUUC-Sar-113719	Sorex araneus	30.56	5.00e-68	250.00
IUUC-Sbi-113927	Sorghum bicolor	26.35	1.00e-57	216.00
IUUC-Sre-114938	Sporisorium reilianum	32.92	9.00e-37	147.00
IUUC-Ssc-116186	Sus scrofa	30.25	7.00e-68	250.00
IUUC-Tru-117768	Takifugu rubripes	31.83	1.00e-62	233.00
IUUC-Tsy-118957	Tarsius syrichta	30.43	6.00e-65	241.00
IUUC-Tni-120618	Tetraodon nigroviridis	31.56	2.00e-68	251.00
IUUC-Tca-121137	Theobroma cacao	27.80	4.00e-63	234.00
IUUC-Tre-121896	Trichoderma reesei	27.53	6.00e-57	214.00
IUUC-Tvi-122597	Trichoderma virens	27.19	1.00e-56	213.00
IUUC-Tae-123773	Triticum aestivum	29.32	2.00e-39	155.00
IUUC-Tur-125999	Triticum urartu	28.63	3.00e-64	238.00
IUUC-Tme-126953	Tuber melanosporum	27.22	3.00e-54	205.00
IUUC-Tbe-127642	Tupaia belangeri	35.38	2.00e-21	96.70
IUUC-Ttr-128243	Tursiops truncatus	27.51	4.00e-29	122.00
IUUC-Uma-129441	Ustilago maydis	33.06	1.00e-36	146.00
IUUC-Vda-129933	Verticillium dahliae	28.15	3.00e-49	188.00
IUUC-Vpa-130672	Vicugna pacos	30.74	2.00e-63	235.00
IUUC-Vvi-131204	Vitis vinifera	30.77	5.00e-62	231.00
IUUC-Xtr-132730	Xenopus tropicalis	30.78	4.00e-67	248.00
IUUC-Xma-133384	Xiphophorus maculatus	31.55	1.00e-68	253.00
IUUC-Yli-134588	Yarrowia lipolytica	26.29	3.00e-47	182.00
IUUC-Zma-134966	Zea mays	31.15	4.00e-67	247.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence