iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121137

Ensembl Protein ID

EOY33587

UniProt Accession

A0A061GWM6; A0A061GWM6_THECC

Genbank Protein ID

EOY33587.1

Protein Name

DNA/RNA helicase protein isoform 1

Genbank Nucleotide ID

CM001887

Gene Name

TCM_041526

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_041526	EOY33587	EOY33587

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.60e-07	31.2	799	839

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadCl.qkwpglknssskefrCPlCr 46
           C+iCle f+d  +++pC H  +++Cl   w        ++ +CP+Cr
   Q: 799  CPICLEAFED-AVLTPCAHRLCRECLlASW-----RNPNSGLCPVCR 839
           **********.888***********98999.....5778889****8 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MGGSKVTEDL ISTVRSIVGL EHSEMDIIRA LHLAKNDATA AINIIFDSPP NLKPREKQPE 60
PETPNSSSHT TSVSVNPKKS GKDYKNSSFS SNGNVTCGAS IVEDEEDATV ENDWWLVGSS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CACAAGATCG AAGCTTTTCT AAAGTCGAAA AAAAGAAAAA GAAAACAAGG AAAAGAGGGG 60
GTAGAGGCAG ACTTGCATTG CACTAATATA AAAGTGGCGG GAAAAGGTGA CGCGTCAGCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0067--ATP-binding
KW-0181--Complete proteome
KW-0347--Helicase
KW-0378--Hydrolase
KW-0547--Nucleotide-binding
KW-1185--Reference proteome

Interpro

IPR014001--Helicase_ATP-bd
IPR001650--Helicase_C
IPR014905--HIRAN
IPR027417--P-loop_NTPase
IPR000330--SNF2_N
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS51192--HELICASE_ATP_BIND_1
PS51194--HELICASE_CTER
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00271--Helicase_C
PF08797--HIRAN
PF00176--SNF2_N

SMART

SM00487--DEXDc
SM00490--HELICc
SM00910--HIRAN
SM00184--RING

Gene Ontology

GO:0005524--F:ATP binding
GO:0004386--F:helicase activity
GO:0003676--F:nucleic acid binding
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003139	Amborella trichopoda	69.93	0.00e+00	1481.00
IUUC-Apl-003679	Anas platyrhynchos	31.58	5.00e-75	275.00
IUUC-Aly-006331	Arabidopsis lyrata	73.08	0.00e+00	1516.00
IUUC-Ath-007517	Arabidopsis thaliana	72.84	0.00e+00	1519.00
IUUC-Ago-007997	Ashbya gossypii	29.93	7.00e-103	368.00
IUUC-Afl-008514	Aspergillus flavus	31.00	8.00e-130	457.00
IUUC-Afu-009055	Aspergillus fumigatus	32.74	7.00e-129	454.00
IUUC-Ani-009340	Aspergillus nidulans	32.02	3.00e-121	429.00
IUUC-Ang-009785	Aspergillus niger	31.38	3.00e-129	456.00
IUUC-Aor-010158	Aspergillus oryzae	31.00	2.00e-129	456.00
IUUC-Bgr-012147	Blumeria graminis	32.62	1.00e-132	466.00
IUUC-Bdi-014646	Brachypodium distachyon	65.08	0.00e+00	1335.00
IUUC-Bol-015484	Brassica oleracea	71.58	0.00e+00	1461.00
IUUC-Bra-016925	Brassica rapa	71.18	0.00e+00	1461.00
IUUC-Cre-022824	Chlamydomonas reinhardtii	27.49	4.00e-59	223.00
IUUC-Csv-026168	Ciona savignyi	28.29	2.00e-41	163.00
IUUC-Cgl-026606	Colletotrichum gloeosporioides	37.14	3.00e-135	476.00
IUUC-Cne-026886	Cryptococcus neoformans	32.63	4.00e-138	485.00
IUUC-Cme-027110	Cyanidioschyzon merolae	36.84	8.00e-127	447.00
IUUC-Eeu-034597	Erinaceus europaeus	30.98	4.00e-60	226.00
IUUC-Fal-037486	Ficedula albicollis	31.73	1.00e-71	263.00
IUUC-Fox-038039	Fusarium oxysporum	37.63	6.00e-136	478.00
IUUC-Fso-038179	Fusarium solani	34.25	6.00e-147	514.00
IUUC-Gmo-038544	Gadus morhua	40.22	3.00e-110	392.00
IUUC-Ggr-039735	Gaeumannomyces graminis	34.24	4.00e-136	478.00
IUUC-Gga-040472	Gallus gallus	31.85	4.00e-45	176.00
IUUC-Gac-042401	Gasterosteus aculeatus	39.24	4.00e-110	392.00
IUUC-Gma-042995	Glycine max	74.95	0.00e+00	1567.00
IUUC-Hvu-047495	Hordeum vulgare	62.78	0.00e+00	1134.00
IUUC-Kpa-049087	Komagataella pastoris	30.68	2.00e-106	379.00
IUUC-Lpe-051584	Leersia perrieri	61.66	0.00e+00	1243.00
IUUC-Lma-052956	Leptosphaeria maculans	36.83	5.00e-133	468.00
IUUC-Mor-057210	Magnaporthe oryzae	32.60	1.00e-137	483.00
IUUC-Mpo-057407	Magnaporthe poae	33.20	1.00e-143	503.00
IUUC-Mtr-058565	Medicago truncatula	72.04	0.00e+00	1481.00
IUUC-Mga-059553	Meleagris gallopavo	33.25	5.00e-45	176.00
IUUC-Mvi-060322	Microbotryum violaceum	33.74	1.00e-94	340.00
IUUC-Mac-065174	Musa acuminata	58.94	0.00e+00	744.00
IUUC-Nfi-068354	Neosartorya fischeri	32.64	1.00e-128	453.00
IUUC-Ncr-068844	Neurospora crassa	35.84	2.00e-128	453.00
IUUC-Oba-075937	Oryza barthii	66.56	0.00e+00	1217.00
IUUC-Obr-076403	Oryza brachyantha	69.92	0.00e+00	1268.00
IUUC-Ogl-077573	Oryza glaberrima	64.58	0.00e+00	1350.00
IUUC-Ogu-077957	Oryza glumaepatula	66.85	0.00e+00	1231.00
IUUC-Oin-079146	Oryza indica	70.21	0.00e+00	1323.00
IUUC-Olo-080437	Oryza longistaminata	59.21	0.00e+00	1051.00
IUUC-Ome-081448	Oryza meridionalis	62.88	0.00e+00	1284.00
IUUC-Oni-082389	Oryza nivara	66.37	0.00e+00	1209.00
IUUC-Opu-083322	Oryza punctata	62.64	0.00e+00	1246.00
IUUC-Oru-085066	Oryza rufipogon	66.63	0.00e+00	1232.00
IUUC-Osa-085686	Oryza sativa	71.53	0.00e+00	1200.00
IUUC-Ola-086830	Oryzias latipes	35.51	4.00e-98	352.00
IUUC-Pan-091844	Papio anubis	33.12	5.00e-48	186.00
IUUC-Psi-093626	Pelodiscus sinensis	38.90	8.00e-110	390.00
IUUC-Pno-094916	Phaeosphaeria nodorum	34.25	4.00e-135	475.00
IUUC-Ppa-095877	Physcomitrella patens	56.12	0.00e+00	1071.00
IUUC-Pop-099320	Populus trichocarpa	77.37	0.00e+00	1586.00
IUUC-Ppe-101820	Prunus persica	77.19	0.00e+00	1587.00
IUUC-Pva-102896	Pteropus vampyrus	38.35	4.00e-87	315.00
IUUC-Pgr-103454	Puccinia graminis	28.47	2.00e-107	383.00
IUUC-Ptt-103829	Puccinia triticina	28.60	3.00e-95	342.00
IUUC-Pte-104242	Pyrenophora teres	35.55	5.00e-128	451.00
IUUC-Pyt-104728	Pyrenophora triticirepentis	34.81	1.00e-127	450.00
IUUC-Spo-108026	Schizosaccharomyces pombe	33.12	7.00e-132	464.00
IUUC-Smo-108977	Selaginella moellendorffii	67.47	1.00e-155	541.00
IUUC-Sit-110076	Setaria italica	65.43	0.00e+00	1307.00
IUUC-Sly-111908	Solanum lycopersicum	71.23	0.00e+00	1509.00
IUUC-Sbi-113927	Sorghum bicolor	65.09	0.00e+00	1315.00
IUUC-Sre-115131	Sporisorium reilianum	35.28	2.00e-121	429.00
IUUC-Tru-117768	Takifugu rubripes	39.75	1.00e-101	363.00
IUUC-Tvi-122597	Trichoderma virens	37.11	8.00e-141	494.00
IUUC-Tae-125934	Triticum aestivum	65.75	0.00e+00	1321.00
IUUC-Tur-126433	Triticum urartu	68.60	0.00e+00	1024.00
IUUC-Tme-126953	Tuber melanosporum	33.62	1.00e-133	469.00
IUUC-Tbe-127642	Tupaia belangeri	36.97	2.00e-44	174.00
IUUC-Ttr-128243	Tursiops truncatus	34.16	2.00e-53	203.00
IUUC-Uma-129629	Ustilago maydis	33.77	1.00e-120	427.00
IUUC-Vvi-130943	Vitis vinifera	76.30	0.00e+00	1615.00
IUUC-Yli-134588	Yarrowia lipolytica	30.12	4.00e-102	365.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence