iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aly-005446

UUCD1 version

UUC-ArL-01010

Ensembl Protein ID

Al_scaffold_0005_1174

UniProt Accession

D7LNS2; D7LNS2_ARALL

Genbank Protein ID

EFH51920.1

Protein Name

Protein HIRA

Genbank Nucleotide ID

GL348717

Gene Name

HIRA; ARALYDRAFT_665139

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Al_scaffold_0005_1174	Al_scaffold_0005_1174	Al_scaffold_0005_1174

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.40e-21	74.8	116	153

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvll 36
           gHt++v +l++ +d  +l+sGs D+t+++W++rtg ++
   Q: 116  GHTADVVDLNWsPDdSMLASGSLDNTVHIWNMRTGMCT 153
           8***********777********************986 PP

Organism

Arabidopsis lyrata

Functional Description
(View)

Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle.

Protein Sequence
(Fasta)

MIAEKPSWVK HEGVQIFSID VQPNGERFAT GGGDHKSVDK DLQNLDTKER LLATLRDHFG 60
SVNCVRWAKH SRYVASGSDD QVIQIHERKP GSGTTEFGSG EAPDVENWKA VMTLRGHTAD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGATTGCGG AGAAACCCTC TTGGGTTAAA CATGAAGGGG TACAGATATT CTCCATTGAT 60
GTTCAACCTA ATGGAGAAAG GTTTGCTACA GGCGGTGGTG ACCACAAGGT CAGTGCTTTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0156--Chromatin regulator
KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0678--Repressor
KW-0804--Transcription
KW-0805--Transcription regulation
KW-0853--WD repeat

Interpro

IPR031120--HIR1
IPR011494--Hira
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF07569--Hira
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus
GO:0016569--P:covalent chromatin modification
GO:0006355--P:regulation of transcription, DNA-templated
GO:0006351--P:transcription, DNA-templated

KEGG

aly:ARALYDRAFT_665139

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001039	Aegilops tauschii	62.73	0.00e+00	1243.00
IUUC-Aml-001723	Ailuropoda melanoleuca	38.48	7.00e-73	268.00
IUUC-Atr-003132	Amborella trichopoda	64.85	0.00e+00	1244.00
IUUC-Apl-003197	Anas platyrhynchos	33.60	3.00e-73	269.00
IUUC-Aca-004733	Anolis carolinensis	34.66	3.00e-78	286.00
IUUC-Ath-007627	Arabidopsis thaliana	91.02	0.00e+00	1909.00
IUUC-Ago-007766	Ashbya gossypii	30.08	1.00e-54	207.00
IUUC-Acl-008104	Aspergillus clavatus	32.25	4.00e-67	249.00
IUUC-Afl-008591	Aspergillus flavus	30.92	1.00e-65	244.00
IUUC-Afu-008781	Aspergillus fumigatus	32.41	6.00e-61	228.00
IUUC-Ani-009272	Aspergillus nidulans	28.16	2.00e-47	184.00
IUUC-Ang-009655	Aspergillus niger	33.41	7.00e-63	235.00
IUUC-Aor-010119	Aspergillus oryzae	30.92	2.00e-65	243.00
IUUC-Ate-010530	Aspergillus terreus	26.59	5.00e-49	189.00
IUUC-Bgr-012237	Blumeria graminis	33.85	1.00e-61	230.00
IUUC-Bta-013320	Bos taurus	38.48	7.00e-73	268.00
IUUC-Bci-013795	Botrytis cinerea	33.65	2.00e-65	244.00
IUUC-Bdi-014075	Brachypodium distachyon	64.75	0.00e+00	1269.00
IUUC-Bol-016440	Brassica oleracea	84.62	0.00e+00	1730.00
IUUC-Bra-016651	Brassica rapa	84.82	0.00e+00	1675.00
IUUC-Cel-018692	Caenorhabditis elegans	29.31	3.00e-45	176.00
IUUC-Cja-018987	Callithrix jacchus	34.29	4.00e-68	252.00
IUUC-Cfa-020132	Canis familiaris	38.44	4.00e-73	269.00
IUUC-Cpo-021484	Cavia porcellus	39.74	4.00e-77	282.00
IUUC-Cre-022846	Chlamydomonas reinhardtii	34.19	8.00e-65	241.00
IUUC-Csa-023081	Chlorocebus sabaeus	34.41	2.00e-77	283.00
IUUC-Cin-025182	Ciona intestinalis	36.42	4.00e-80	292.00
IUUC-Csv-026154	Ciona savignyi	35.31	2.00e-79	290.00
IUUC-Cgl-026655	Colletotrichum gloeosporioides	30.09	1.00e-61	231.00
IUUC-Cne-026891	Cryptococcus neoformans	38.46	1.00e-77	284.00
IUUC-Cme-027349	Cyanidioschyzon merolae	25.13	1.00e-58	221.00
IUUC-Dre-027655	Danio rerio	38.72	2.00e-75	276.00
IUUC-Dno-029557	Dasypus novemcinctus	39.38	1.00e-64	240.00
IUUC-Dor-030687	Dipodomys ordii	35.05	4.00e-56	212.00
IUUC-Dse-031334	Dothistroma septosporum	32.01	6.00e-64	238.00
IUUC-Dme-031746	Drosophila melanogaster	36.83	2.00e-78	287.00
IUUC-Ete-032384	Echinops telfairi	30.33	2.00e-53	203.00
IUUC-Eca-033430	Equus caballus	34.22	1.00e-73	271.00
IUUC-Fca-036121	Felis catus	38.40	2.00e-74	273.00
IUUC-Fal-036817	Ficedula albicollis	38.22	2.00e-72	266.00
IUUC-Fox-037906	Fusarium oxysporum	34.49	5.00e-66	244.00
IUUC-Fso-038409	Fusarium solani	26.57	3.00e-80	293.00
IUUC-Gmo-039151	Gadus morhua	39.47	1.00e-76	280.00
IUUC-Ggr-040016	Gaeumannomyces graminis	34.02	2.00e-64	239.00
IUUC-Gga-040936	Gallus gallus	34.27	6.00e-77	281.00
IUUC-Gac-041405	Gasterosteus aculeatus	34.62	2.00e-74	273.00
IUUC-Gma-044252	Glycine max	69.59	0.00e+00	1381.00
IUUC-Ggo-045430	Gorilla gorilla	34.41	2.00e-77	283.00
IUUC-Hsa-046442	Homo sapiens	34.41	2.00e-77	283.00
IUUC-Hvu-047587	Hordeum vulgare	64.91	0.00e+00	1214.00
IUUC-Itr-048910	Ictidomys tridecemlineatus	39.49	2.00e-55	208.00
IUUC-Kpa-049145	Komagataella pastoris	29.74	8.00e-51	194.00
IUUC-Lch-050474	Latimeria chalumnae	38.62	1.00e-73	271.00
IUUC-Lpe-051209	Leersia perrieri	64.26	0.00e+00	1217.00
IUUC-Loc-052119	Lepisosteus oculatus	34.46	7.00e-75	275.00
IUUC-Lma-053237	Leptosphaeria maculans	31.72	9.00e-60	224.00
IUUC-Laf-053718	Loxodonta africana	39.23	3.00e-77	283.00
IUUC-Mcc-055621	Macaca mulatta	38.73	3.00e-67	249.00
IUUC-Meu-055914	Macropus eugenii	38.72	5.00e-48	185.00
IUUC-Mor-057090	Magnaporthe oryzae	33.72	1.00e-63	238.00
IUUC-Mpo-057364	Magnaporthe poae	34.70	2.00e-65	243.00
IUUC-Mtr-057744	Medicago truncatula	72.00	0.00e+00	1387.00
IUUC-Mla-058914	Melampsora laricipopulina	31.82	7.00e-60	224.00
IUUC-Mga-060181	Meleagris gallopavo	33.81	1.00e-72	267.00
IUUC-Mvi-060432	Microbotryum violaceum	26.31	1.00e-63	237.00
IUUC-Mmr-060871	Microcebus murinus	34.07	6.00e-78	285.00
IUUC-Mdo-062301	Monodelphis domestica	34.86	2.00e-77	283.00
IUUC-Mmu-063888	Mus musculus	35.20	3.00e-78	286.00
IUUC-Mac-064768	Musa acuminata	66.60	0.00e+00	1228.00
IUUC-Mpu-066732	Mustela putorius furo	38.48	5.00e-73	268.00
IUUC-Mlu-067542	Myotis lucifugus	33.67	4.00e-74	272.00
IUUC-Nfi-068396	Neosartorya fischeri	32.41	5.00e-61	229.00
IUUC-Ncr-068842	Neurospora crassa	35.80	4.00e-66	246.00
IUUC-Nle-070156	Nomascus leucogenys	34.41	2.00e-77	283.00
IUUC-Opr-070808	Ochotona princeps	38.31	4.00e-49	189.00
IUUC-Ont-072105	Oreochromis niloticus	36.00	3.00e-75	276.00
IUUC-Ocu-074962	Oryctolagus cuniculus	34.22	8.00e-74	271.00
IUUC-Oba-075178	Oryza barthii	65.98	0.00e+00	1215.00
IUUC-Obr-076399	Oryza brachyantha	65.98	0.00e+00	1240.00
IUUC-Ogu-078797	Oryza glumaepatula	65.98	0.00e+00	1215.00
IUUC-Oin-080085	Oryza indica	65.95	0.00e+00	1160.00
IUUC-Olo-081048	Oryza longistaminata	80.50	3.00e-157	548.00
IUUC-Ome-081324	Oryza meridionalis	65.88	0.00e+00	1215.00
IUUC-Oni-082548	Oryza nivara	65.77	0.00e+00	1214.00
IUUC-Opu-084008	Oryza punctata	71.22	0.00e+00	686.00
IUUC-Oru-084339	Oryza rufipogon	66.77	0.00e+00	1216.00
IUUC-Osa-085782	Oryza sativa	66.77	0.00e+00	1216.00
IUUC-Ola-087302	Oryzias latipes	34.75	1.00e-74	274.00
IUUC-Olu-087611	Ostreococcus lucimarinus	38.65	3.00e-107	382.00
IUUC-Oga-087935	Otolemur garnettii	38.48	5.00e-73	269.00
IUUC-Oar-089229	Ovis aries	34.35	8.00e-57	215.00
IUUC-Ptr-090715	Pan troglodytes	34.41	2.00e-77	283.00
IUUC-Pan-092318	Papio anubis	33.94	1.00e-73	270.00
IUUC-Psi-094053	Pelodiscus sinensis	34.47	6.00e-74	271.00
IUUC-Pno-094985	Phaeosphaeria nodorum	30.91	1.00e-55	211.00
IUUC-Ppa-095819	Physcomitrella patens	47.37	0.00e+00	883.00
IUUC-Pfo-096857	Poecilia formosa	39.13	3.00e-73	269.00
IUUC-Pab-098047	Pongo abelii	34.41	2.00e-77	283.00
IUUC-Pop-099587	Populus trichocarpa	68.86	0.00e+00	1393.00
IUUC-Pca-100558	Procavia capensis	45.08	3.00e-43	170.00
IUUC-Ppe-101261	Prunus persica	70.30	0.00e+00	1341.00
IUUC-Pva-102683	Pteropus vampyrus	34.21	7.00e-75	275.00
IUUC-Pgr-103660	Puccinia graminis	26.58	4.00e-61	229.00
IUUC-Ptt-103900	Puccinia triticina	36.34	6.00e-57	214.00
IUUC-Pte-104209	Pyrenophora teres	33.10	3.00e-64	239.00
IUUC-Pyt-104802	Pyrenophora triticirepentis	33.10	2.00e-63	237.00
IUUC-Rno-105566	Rattus norvegicus	34.80	6.00e-78	285.00
IUUC-Sce-106291	Saccharomyces cerevisiae	29.98	2.00e-58	219.00
IUUC-Sha-107514	Sarcophilus harrisii	32.14	8.00e-63	234.00
IUUC-Sja-107833	Schizosaccharomyces japonicus	27.61	1.00e-79	290.00
IUUC-Spo-108162	Schizosaccharomyces pombe	31.21	9.00e-65	241.00
IUUC-Smo-109186	Selaginella moellendorffii	49.12	0.00e+00	873.00
IUUC-Sit-110730	Setaria italica	65.95	0.00e+00	1247.00
IUUC-Sly-111547	Solanum lycopersicum	66.77	0.00e+00	1276.00
IUUC-Stu-112705	Solanum tuberosum	67.30	0.00e+00	1282.00
IUUC-Sar-113222	Sorex araneus	33.13	6.00e-68	251.00
IUUC-Sbi-114272	Sorghum bicolor	66.36	0.00e+00	1246.00
IUUC-Sre-115061	Sporisorium reilianum	33.00	4.00e-69	255.00
IUUC-Ssc-116364	Sus scrofa	33.60	5.00e-73	268.00
IUUC-Tgu-116645	Taeniopygia guttata	38.22	3.00e-72	266.00
IUUC-Tru-117590	Takifugu rubripes	34.93	5.00e-78	285.00
IUUC-Tsy-119212	Tarsius syrichta	38.62	9.00e-62	231.00
IUUC-Tni-119915	Tetraodon nigroviridis	35.87	1.00e-77	284.00
IUUC-Tca-121765	Theobroma cacao	72.05	0.00e+00	1395.00
IUUC-Tre-121887	Trichoderma reesei	33.79	3.00e-58	219.00
IUUC-Tvi-122262	Trichoderma virens	33.10	2.00e-57	217.00
IUUC-Tae-123009	Triticum aestivum	60.77	0.00e+00	785.00
IUUC-Tur-126483	Triticum urartu	64.98	0.00e+00	1261.00
IUUC-Tme-127202	Tuber melanosporum	27.33	3.00e-43	169.00
IUUC-Tbe-127350	Tupaia belangeri	33.91	2.00e-44	174.00
IUUC-Ttr-129077	Tursiops truncatus	35.09	5.00e-65	242.00
IUUC-Uma-129465	Ustilago maydis	31.21	2.00e-68	254.00
IUUC-Vda-129844	Verticillium dahliae	32.14	5.00e-65	242.00
IUUC-Vvi-131397	Vitis vinifera	69.10	0.00e+00	1389.00
IUUC-Xtr-132057	Xenopus tropicalis	38.72	3.00e-76	279.00
IUUC-Xma-134139	Xiphophorus maculatus	39.22	7.00e-65	241.00
IUUC-Yli-134424	Yarrowia lipolytica	32.94	3.00e-56	213.00
IUUC-Zma-135839	Zea mays	64.78	0.00e+00	1247.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence