iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Aca-004717

Ensembl Protein ID

ENSACAP00000015944.3

UniProt Accession

G1KSB7; G1KSB7_ANOCA

Protein Name

Uncharacterized protein

Gene Name

TNRC6C

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSACAG00000016198.3	ENSACAT00000016262.3	ENSACAP00000015944.3

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
UBD/Alpha-Helix/UBA	58.89	1.00e-24	113.00	IUUC-Dme-032014

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Anolis carolinensis

Protein Sequence
(Fasta)

MEEKKKKKQE EKKKKEGAQK KAAEQKTKAD VSVVKPENSA DKGVPEPIKT SLSQPQPAGT 60
STSTSTSTIT NNSNGKRASA NGQQPAASRY LPREVPPRFR QQEQKQLLKR GQPLPTGTLI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAAGAAA AGAAAAAGAA AAAGCAGGAA GAAAAGAAAA AGAAGGAAGG TGCTCAGAAA 60
AAGGTTTGTC CTTAAATCAT TATAAAGATT TCACTTTAAT GTTTTGGGTG ATTCATAAGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR019486--Argonaute_hook_dom
IPR026805--GW182_M_dom
IPR012677--Nucleotide-bd_a/b_plait
IPR000504--RRM_dom
IPR032226--TNRC6_PABC-bd
IPR033499--TNRC6C
IPR015940--UBA
IPR009060--UBA-like

PROSITE

PS50030--UBA

Pfam

PF10427--Ago_hook
PF12938--M_domain
PF16608--TNRC6-PABC_bdg
PF00627--UBA

SMART

SM00165--UBA

Gene Ontology

GO:0003676--F:nucleic acid binding
GO:0000166--F:nucleotide binding
GO:0035278--P:miRNA mediated inhibition of translation
GO:0060213--P:positive regulation of nuclear-transcribed mRNA poly(A) tail shortening

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001985	Ailuropoda melanoleuca	41.44	0.00e+00	840.00
IUUC-Apl-003191	Anas platyrhynchos	90.43	0.00e+00	2552.00
IUUC-Ame-010681	Astyanax mexicanus	50.74	0.00e+00	844.00
IUUC-Bta-012915	Bos taurus	36.83	3.00e-119	423.00
IUUC-Cja-019614	Callithrix jacchus	83.61	0.00e+00	2083.00
IUUC-Cfa-020452	Canis familiaris	37.07	3.00e-129	457.00
IUUC-Cpo-021452	Cavia porcellus	82.92	0.00e+00	2217.00
IUUC-Csa-023169	Chlorocebus sabaeus	41.32	0.00e+00	830.00
IUUC-Cho-024655	Choloepus hoffmanni	39.30	3.00e-123	437.00
IUUC-Dre-028059	Danio rerio	57.45	0.00e+00	1091.00
IUUC-Dno-029734	Dasypus novemcinctus	40.47	0.00e+00	825.00
IUUC-Dor-030671	Dipodomys ordii	44.80	0.00e+00	675.00
IUUC-Dme-032014	Drosophila melanogaster	37.64	2.00e-28	121.00
IUUC-Ete-032774	Echinops telfairi	76.89	0.00e+00	1381.00
IUUC-Eca-033866	Equus caballus	85.08	0.00e+00	2090.00
IUUC-Eeu-034572	Erinaceus europaeus	62.87	4.00e-41	164.00
IUUC-Fal-036856	Ficedula albicollis	89.76	0.00e+00	2170.00
IUUC-Gga-040531	Gallus gallus	89.70	0.00e+00	2518.00
IUUC-Gac-041681	Gasterosteus aculeatus	51.90	0.00e+00	906.00
IUUC-Ggo-045143	Gorilla gorilla	83.32	0.00e+00	2119.00
IUUC-Hsa-045913	Homo sapiens	84.52	0.00e+00	2119.00
IUUC-Hvu-047206	Hordeum vulgare	38.24	9.00e-01	28.50
IUUC-Lch-049619	Latimeria chalumnae	42.89	0.00e+00	940.00
IUUC-Loc-052289	Lepisosteus oculatus	70.60	0.00e+00	1105.00
IUUC-Laf-053607	Loxodonta africana	84.43	0.00e+00	2411.00
IUUC-Mcc-055342	Macaca mulatta	84.75	0.00e+00	2076.00
IUUC-Meu-056275	Macropus eugenii	50.56	1.00e-105	379.00
IUUC-Mga-059241	Meleagris gallopavo	40.38	9.00e-164	572.00
IUUC-Mmr-061348	Microcebus murinus	37.12	6.00e-127	449.00
IUUC-Mdo-062155	Monodelphis domestica	84.55	0.00e+00	2501.00
IUUC-Mmu-064259	Mus musculus	41.81	6.00e-112	399.00
IUUC-Mpu-066534	Mustela putorius furo	36.71	2.00e-92	334.00
IUUC-Mlu-067834	Myotis lucifugus	41.04	0.00e+00	863.00
IUUC-Nle-069168	Nomascus leucogenys	40.97	0.00e+00	807.00
IUUC-Opr-070976	Ochotona princeps	39.86	8.00e-81	296.00
IUUC-Ocu-074534	Oryctolagus cuniculus	67.89	0.00e+00	852.00
IUUC-Oga-088116	Otolemur garnettii	41.48	0.00e+00	843.00
IUUC-Oar-090041	Ovis aries	36.43	2.00e-106	381.00
IUUC-Ptr-091135	Pan troglodytes	86.65	0.00e+00	2089.00
IUUC-Pan-092665	Papio anubis	87.06	0.00e+00	2089.00
IUUC-Psi-093057	Pelodiscus sinensis	88.56	0.00e+00	2332.00
IUUC-Pma-094508	Petromyzon marinus	37.81	9.00e-74	271.00
IUUC-Pfo-097115	Poecilia formosa	57.18	0.00e+00	661.00
IUUC-Pab-097935	Pongo abelii	41.44	0.00e+00	840.00
IUUC-Pca-100481	Procavia capensis	75.11	0.00e+00	886.00
IUUC-Pva-102376	Pteropus vampyrus	39.77	3.00e-80	293.00
IUUC-Rno-105508	Rattus norvegicus	37.40	2.00e-127	451.00
IUUC-Sly-111284	Solanum lycopersicum	30.12	2.00e-02	34.30
IUUC-Stu-112750	Solanum tuberosum	28.92	3.00e-01	30.40
IUUC-Sar-113036	Sorex araneus	60.95	3.00e-42	168.00
IUUC-Sbi-114163	Sorghum bicolor	29.23	6.80e-01	29.30
IUUC-Ssc-115574	Sus scrofa	66.19	0.00e+00	1397.00
IUUC-Tgu-117233	Taeniopygia guttata	90.09	0.00e+00	2282.00
IUUC-Tru-117725	Takifugu rubripes	55.23	0.00e+00	977.00
IUUC-Tsy-118786	Tarsius syrichta	37.34	8.00e-74	273.00
IUUC-Tbe-127989	Tupaia belangeri	79.34	0.00e+00	714.00
IUUC-Ttr-128518	Tursiops truncatus	84.66	0.00e+00	2245.00
IUUC-Vpa-130230	Vicugna pacos	42.88	3.00e-76	281.00
IUUC-Xtr-132265	Xenopus tropicalis	73.45	0.00e+00	1841.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence