iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111098

Ensembl Protein ID

Solyc11g073170.1.1

UniProt Accession

K4DB23; K4DB23_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc11g073170.1	Solyc11g073170.1.1	Solyc11g073170.1.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.80e-06	29.1	106	148

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl +f++g  ++ lp C Hvfh  C+  w       + + +CPlCr
   Q: 106  CAVCLGEFQEGewLKHLPyCSHVFHVACIDTW------FQIHSSCPLCR 148
           ********88777566778*************......**********8 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MSSPDSTPRI GPSHWDPLLI VSVGIVCFIL LLFSYFKIIQ TRCCGFLTVH FYRNPIQRRP 60
LNDHILEDHD LQLQSRGLDS YIMHSLPITQ FKKNEELTAP LNNADCAVCL GEFQEGEWLK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCTAGTC CAGACTCCAC TCCACGGATT GGACCTTCGC ATTGGGATCC GCTACTGATT 60
GTCTCTGTAG GGATAGTTTG TTTTATCCTT CTGCTATTCA GTTACTTCAA GATTATACAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

sly:104644787

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002876	Amborella trichopoda	34.54	4.00e-24	103.00
IUUC-Gma-043983	Glycine max	41.86	6.00e-33	132.00
IUUC-Mtr-058316	Medicago truncatula	52.59	2.00e-23	101.00
IUUC-Pop-098811	Populus trichocarpa	53.04	3.00e-29	119.00
IUUC-Ppe-101262	Prunus persica	62.92	2.00e-29	119.00
IUUC-Stu-112473	Solanum tuberosum	90.86	1.00e-103	367.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence