iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112180

Ensembl Protein ID

PGSC0003DMT400040923

UniProt Accession

M1BAM8; M1BAM8_SOLTU

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400015829	PGSC0003DMT400040923	PGSC0003DMT400040923

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.30e-44	146.7	149	183
UBD/Beta-Prp	5.80e-55	187.8	137	272

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd..tllvsGsdDgtikvWDlrt 32
           H+d+v+c++f  ++  +++vsGs+D t+k+W+l+ 
   Q: 149  HSDWVSCVRFspNNlqPTIVSGSWDRTVKIWNLSN 183
           ***********7556788**************976 PP

UBD/Beta-Prp

   S: 84   gkcvhtlk...ghedsvlslsfspsg..dklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlk 167
           g+c +t++    h+d v +++fsp++   ++vsGs+drt+++w+l++ +    tl+gh g vn+++v+pdg+l++sG++D+++ lWdl+
   Q: 137  GECKYTIQdqdSHSDWVSCVRFSPNNlqPTIVSGSWDRTVKIWNLSNCKLRA-TLAGHAGYVNTAAVSPDGSLCASGGKDGVILLWDLA 224
           678888887779************5447*******************99999.************************************ PP
   S: 168  tgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtl 218
            gk l+ l +   + ++ l f++n ++ + +++ +++k+wdl+++++v+ l
   Q: 225  EGKKLYSLDS--GSIIHALCFSPN-RYWLCAATESSIKIWDLESKSIVVDL 272
           ********65..89999******9.699999**************998765 PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MSQESLVLRG TMKAHTDWVT AIATPIDNSD MIVTSSRDKS IIVWSLTKEG SQYGVPRRRL 60
TGHGHFVQDV VLSSDGMFAL SGSWDGELRL WDLQAGTTAR RFVGHTKDVL SVAFSVDNRQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATCCAATTGA GTTAGTTAGG GTTCCTCCTT CCTTCTTCCC TCACTTCCAT TTCGCTTCAA 60
TCACTGTTGG ACACAATGTC GCAAGAATCT CTAGTCCTCC GCGGCACAAT GAAGGCCCAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

sot:102579003

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000395	Aegilops tauschii	74.23	4.00e-125	439.00
IUUC-Ago-007720	Ashbya gossypii	48.48	4.00e-89	320.00
IUUC-Eca-033296	Equus caballus	71.71	1.00e-60	224.00
IUUC-Gmo-039630	Gadus morhua	67.08	1.00e-124	438.00
IUUC-Gac-041316	Gasterosteus aculeatus	65.42	3.00e-123	433.00
IUUC-Opr-071100	Ochotona princeps	57.28	6.00e-96	342.00
IUUC-Ont-072287	Oreochromis niloticus	66.25	3.00e-126	443.00
IUUC-Ola-086400	Oryzias latipes	65.94	9.00e-126	441.00
IUUC-Pfo-097311	Poecilia formosa	65.63	5.00e-125	439.00
IUUC-Ptt-103839	Puccinia triticina	64.09	1.00e-121	427.00
IUUC-Sly-111839	Solanum lycopersicum	99.70	0.00e+00	667.00
IUUC-Tru-118202	Takifugu rubripes	65.94	5.00e-125	439.00
IUUC-Ttr-128637	Tursiops truncatus	59.44	3.00e-104	370.00
IUUC-Vpa-130410	Vicugna pacos	56.20	2.00e-77	281.00
IUUC-Vvi-131115	Vitis vinifera	86.81	2.00e-166	576.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence