iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111530

Ensembl Protein ID

Solyc12g088570.1.1

UniProt Accession

K4DGS8; K4DGS8_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc12g088570.1	Solyc12g088570.1.1	Solyc12g088570.1.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.30e-24	85.9	111	142

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDl 30
           gHt++v+++a+ ++  ll+sGs+D t ++W +
   Q: 111  GHTSEVFACAWsPEgSLLASGSGDATARIWTI 142
           8***********8889**************65 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MFSGFTHAAF NFGYEAGINT STIDGMQDDT DMDEDFKLLE PMDLITKSVD ELRKIIKEKN 60
EKAQKKKLRG KGKANADHKR EPTRRTEMEK QHKEKEREHD SEMSDVMVLE GHTSEVFACA 120

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Nucleotide Sequence
(Fasta)

ATGTTTTCAG GATTCACACA TGCAGCATTT AATTTTGGAT ACGAGGCAGG GATAAATACG 60
AGCACGATCG ATGGAATGCA GGATGATACC GATATGGATG AAGACTTCAA GCTTCTAGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR007110--Ig-like_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50835--IG_LIKE
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0000118--C:histone deacetylase complex
GO:0003714--F:transcription corepressor activity
GO:0016575--P:histone deacetylation
GO:0006357--P:regulation of transcription from RNA polymerase II promoter

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence