iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099601

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000338

Gene Name

POPTRDRAFT_408957; POPTR_0002s23480g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0002s23480	POPTR_0002s23480.1	POPTR_0002s23480.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.10e-06	29.9	317	350

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrt 32
           gH d  ++ a+ +d + +++G+ D+t++vWD+r+
   Q: 317  GHLDYSFASAWhPDgNVFATGNQDKTCRVWDIRK 350
           799999999***999****************876 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MSYYQRLEEM NYMAEEAEMV DFVDEMDGGA AAAAAGGVED VDADEYELIT KVTDTSSGQA 60
RNGQDIQGIP WERLNISREN YRSTRLDQYK NYENIPLSGE AVDKECKQME KGGHYYEFFY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GACTTAACTT AACCCTATAT AATAACAATC ATCACCCCTT TTTTAAAAAA AATTAATTTC 60
CTCTCCTCTT TACAATCTGT GTGCGTAAGA GAATCCCTTC CCTTCTTCTT CTCCTTCTCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

pop:POPTR_0002s23480g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Gma-043790	Glycine max	78.83	0.00e+00	693.00
IUUC-Spo-108140	Schizosaccharomyces pombe	31.83	8.00e-38	150.00
IUUC-Sit-110330	Setaria italica	66.92	8.00e-171	592.00
IUUC-Sly-111890	Solanum lycopersicum	72.12	0.00e+00	687.00
IUUC-Stu-112172	Solanum tuberosum	71.11	0.00e+00	698.00
IUUC-Tca-121580	Theobroma cacao	81.43	0.00e+00	752.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence