iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Smo-108909

Ensembl Protein ID

EFJ08618

UniProt Accession

D8T412; D8T412_SELML

Genbank Protein ID

EFJ08618.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

GL377672

Gene Name

SELMODRAFT_42450

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SELMODRAFT_42450	EFJ08618	EFJ08618

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.10e-08	34.9	410	441

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sdtllvsGsdDgtikvWDlrt 32
           H +++t la   + +lvs+s D+t+ vWDlr+
   Q: 410  HGAEITNLAPlEEYYLVSSSLDKTLSVWDLRK 441
           677777777533389**************986 PP

Organism

Selaginella moellendorffii

Protein Sequence
(Fasta)

LQSAAKSILA ACRRSGPELT FLHVMPQFKE FFHALAYSNI SEELDLAYLL YSELASLLGI 60
ERVRQSFPTW LVLEQSLAKK YDWKWTDTSR QFTHSTEALP VEESSNTGSF SPANLLLNGV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTGCAGTCCG CAGCAAAAAG TATTTTAGCC GCTTGTAGAC GAAGTGGACC AGAGCTTACT 60
TTTCTACACG TCATGCCGCA ATTCAAAGAG TTCTTTCATG CCCTTGCGTA CAGCAACATT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

smo:SELMODRAFT_42450

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003087	Amborella trichopoda	39.04	6.00e-97	348.00
IUUC-Aly-006198	Arabidopsis lyrata	36.17	3.00e-41	162.00
IUUC-Ath-007144	Arabidopsis thaliana	37.35	1.00e-100	361.00
IUUC-Bdi-014656	Brachypodium distachyon	35.93	8.00e-93	335.00
IUUC-Bol-016288	Brassica oleracea	38.21	6.00e-104	372.00
IUUC-Bra-017480	Brassica rapa	38.01	3.00e-103	370.00
IUUC-Gmo-038831	Gadus morhua	23.63	2.00e-18	86.30
IUUC-Gac-041852	Gasterosteus aculeatus	25.27	4.00e-21	95.10
IUUC-Gma-043542	Glycine max	38.95	3.00e-107	383.00
IUUC-Hvu-047635	Hordeum vulgare	37.31	6.00e-96	345.00
IUUC-Oba-075734	Oryza barthii	35.80	3.00e-93	336.00
IUUC-Obr-076493	Oryza brachyantha	35.41	2.00e-93	337.00
IUUC-Ogl-077248	Oryza glaberrima	35.74	3.00e-94	340.00
IUUC-Ome-081701	Oryza meridionalis	35.41	4.00e-93	336.00
IUUC-Oni-082138	Oryza nivara	35.91	3.00e-94	339.00
IUUC-Opu-083350	Oryza punctata	36.57	2.00e-95	343.00
IUUC-Oru-085133	Oryza rufipogon	35.30	8.00e-91	328.00
IUUC-Osa-086042	Oryza sativa	35.91	4.00e-94	339.00
IUUC-Pop-100019	Populus trichocarpa	39.73	2.00e-113	404.00
IUUC-Sly-111032	Solanum lycopersicum	36.58	2.00e-98	353.00
IUUC-Sbi-114810	Sorghum bicolor	37.84	1.00e-98	354.00
IUUC-Tgu-116944	Taeniopygia guttata	23.78	4.00e-19	89.70
IUUC-Tca-121706	Theobroma cacao	38.84	4.00e-103	369.00
IUUC-Tae-125578	Triticum aestivum	36.91	4.00e-95	342.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence