iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bol-016241

Ensembl Protein ID

Bo1g005580.1

UniProt Accession

A0A0D3A1I2; A0A0D3A1I2_BRAOL

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bo1g005580	Bo1g005580.1	Bo1g005580.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	5.50e-28	98.3	250	321

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceens 73
           +pe+f+Cp+sl++M dPv+++sG+t++r  I+kw+++g+++cP+ r++l++ +++Pn ++++ i++wc++n+
   Q: 250  LPEHFKCPLSLTVMYDPVMISSGHTFERMWIQKWFDEGNESCPKSRRKLDDFTMKPNVAMKEQISKWCSKNG 321
           79*******************************************************************997 PP

Organism

Brassica oleracea

Protein Sequence
(Fasta)

MGITQRIEKL PHSYKMHSSM CLELKNLVDR VMRIFPDIED ARPGSSTGIQ TLCLINKALE 60
KAKLLLQYCS ESSKLYMAVT GEAILSRGCR AKKLLEQSLS DIRSMVPTVL ATKITQVVQD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGAATTA CTCAACGGAT AGAGAAGTTG CCTCATTCCT ACAAGGTTGG TTGCAAGAAT 60
CTCTTTCATT GTTTTTTTTA CTTTGCTTGT AATAACATTT TTGGTCTTGC TTTGTTTCAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005788	Arabidopsis lyrata	66.93	0.00e+00	882.00
IUUC-Ath-006905	Arabidopsis thaliana	65.95	0.00e+00	865.00
IUUC-Bra-018043	Brassica rapa	92.36	0.00e+00	1179.00
IUUC-Gma-044030	Glycine max	39.86	2.00e-128	452.00
IUUC-Mtr-058215	Medicago truncatula	38.12	1.00e-119	423.00
IUUC-Obr-076217	Oryza brachyantha	32.23	8.00e-84	305.00
IUUC-Ogl-077921	Oryza glaberrima	34.50	6.00e-83	301.00
IUUC-Pop-099657	Populus trichocarpa	43.52	6.00e-138	484.00
IUUC-Ppe-101895	Prunus persica	38.00	2.00e-80	292.00
IUUC-Sly-111406	Solanum lycopersicum	37.01	5.00e-97	348.00
IUUC-Stu-112174	Solanum tuberosum	37.03	9.00e-103	367.00
IUUC-Tca-121394	Theobroma cacao	39.46	3.00e-131	462.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence