• HOME
  • BROWSE
  • SEARCH
  • LINK
  • DOWNLOAD
  • USER GUIDE
  • Protein
  • Gene
  • Annotation
  • Classification
  • Domain Profile
  • Function
  • Protein Sequence
  • Nucleotide Sequence
  • Keyword
  • GO
  • Orthology
  • TOP

Basic Information Integrated Annotations

Tag Content
UUCD2 ID IUUC-Ath-007546
UUCD1 version UUC-ArT-00087
Ensembl Protein ID AT3G50390.1
UniProt Accession A2RVN9; A2RVN9_ARATH
Genbank Protein ID ABN04768.1; AEE78662.1
Protein Name At3g50390; Transducin/WD40 repeat-like superfamily protein
Genbank Nucleotide ID BT030030; CP002686
Gene Name At3g50390
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
AT3G50390 AT3G50390.1 AT3G50390.1
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
TRANSFAC
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 6.50e-33 112.2 210 247
UBD/Beta-Prp 1.80e-42 146.4 210 427
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
    H d ++cla+ d +ll sGs+D+t kvW++++ +++
   Q: 210 HLDAISCLALsEDkRLLYSGSWDKTFKVWRVSDLRCVE 247
    99********866799*****************99986 PP
   


   UBD/Beta-Prp

   S: 9    hksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvw..dlstgkcvhtlk....ghedsvlsl 100
    h + i+c++ s+dk+ll +gs+d+t kvw+v++ +++s+ he++v+av dg + tgs D+t+kvw + ++ ++ h ++ +++ v+++
   Q: 210 HLDAISCLALSEDKRLLYSGSWDKTFKVWRVSDLRCVESVNAHEDAVNAVVSGFDG-LVFTGSADGTVKVWrrEDQAKDTKHFFSetllKQDCAVTAI 306
    67899**************************************************9.**************7733345555544444558999***** PP
   S: 101 sfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl....ktgkllrtltgghtdsvyslsfdsng.. 192
    ++++s + Gs+d t++ w+ e++ + +l+gh+ +v c+v + nl++sGs+D +r+W+ +l ltg h ++v++l++++++
   Q: 307 AVDQSATLVYCGSSDGTVNFWERENNMKNGGVLKGHKLAVLCLVAAG--NLMFSGSADLGIRVWRRpeggGEHVCLSVLTG-HAGPVKCLAVERDQes 401
    ****999999***************999999*************999..*****************88777889999***9.*********9999999 PP
   S: 193 ......kelvsgsldgtvklwdlqtg 212
    + sgsld++vk+w ++++
   Q: 402 vsgerrWIVYSGSLDRSVKMWRVSES 427
    9999988899************9854 PP
   

Organism Arabidopsis thaliana
Protein Sequence
(Fasta)
MSSMHKKGTS RDVNSQAFTK LTKVETIPDP DIYDITYVDI SPSEGSSSPL SKSPWSVQVD 60
PSAVDSPYHS VKVTTDTTKE KSTNHSPNIL LGSLVREEGH IYSLATSGDL LYTGSDSKNI 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Ath-007546|E3,WD_repeat;UBD,Beta-Prp|Arabidopsis thaliana
Please wait for a moment...
Nucleotide Sequence
(Fasta)
CTTCTTCTCC GTAACCTAAA ACTCTGTCTA ATTATAAATC CAACCAAAAC AAAAAAAAAG 60
TCCATCATCT TCTTCTTATG TCTTCAATGC ATAAGAAAGG TACAAGCAGA GACGTAAATA 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Ath-007546|E3,WD_repeat;UBD,Beta-Prp|Arabidopsis thaliana
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG ath:AT3G50390
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Bra-018078 Brassica rapa 77.59 0.00e+00 740.00
IUUC-Mtr-057896 Medicago truncatula 59.12 6.00e-141 493.00
IUUC-Ome-081447 Oryza meridionalis 54.99 7.00e-99 353.00
IUUC-Pop-099710 Populus trichocarpa 63.53 3.00e-146 511.00
IUUC-Ppe-101450 Prunus persica 65.85 4.00e-157 546.00
IUUC-Sly-111339 Solanum lycopersicum 62.76 1.00e-144 505.00
IUUC-Tca-121487 Theobroma cacao 70.54 3.00e-167 580.00
IUUC-Tae-123734 Triticum aestivum 58.92 2.00e-99 355.00
Created Date 25-Jun-2017

https://dev.news.makassarkota.go.id/public/pgsoft-demo/ https://jdih.sumbawabaratkab.go.id/lato/pg-soft-demo/ https://dev.news.makassarkota.go.id/public/slot-gacor/ http://pbb.tanahbumbukab.go.id/-/slot-gacor/ slot gacor https://siakad.unipra.ac.id/sass/slot-gacor-x500/ http://kpm.dinus.ac.id/assets/images/berita/slot/
Copyright © 2004-2017.The CUCKOO Workgroup. All Rights Reserved