iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121487

Ensembl Protein ID

EOX91262

UniProt Accession

A0A061DGN7; A0A061DGN7_THECC

Genbank Protein ID

EOX91262.1

Protein Name

Transducin/WD40 repeat-like superfamily protein, putative

Genbank Nucleotide ID

CM001879

Gene Name

TCM_000509

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_000509	EOX91262	EOX91262

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.60e-31	107.3	304	341
UBD/Beta-Prp	1.50e-62	212.5	199	464

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           H d ++cl++  d tll s+s+D+t kvW++++ ++l 
   Q: 304  HLDAISCLSLnEDkTLLYSASWDKTFKVWRVSDSKCLE 341
           99********8668*******************99986 PP

UBD/Beta-Prp

   S: 14   tcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdls................................ 82
           ++++   +++ll tgs+++ i+vw++++    + ++++++ v+++ +  +   + tg++D+ i+vw +s                                
   Q: 199  YSLAA--SGDLLYTGSDSKNIRVWRNQK--EYSGFKSNSGLVKTIVIAGE--KIFTGHQDGKIRVWKISnknasvhkrvgtlptlkdylrnslkpssyiev 293
           44555..899***************999..5579**************99..69************99999999*******************99999999 PP
   S: 83   .tgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl......ktgkllrtlt 176
            ++   + l +h d + +ls+++++  l s+s+d+t +vw ++  +cle   + hd++vn+vv  +++ l+++Gs+D+tv++W+          +  +tl 
   Q: 294  kKNRSAIWL-KHLDAISCLSLNEDKTLLYSASWDKTFKVWRVSDSKCLE-SIQSHDDAVNSVVA-GFDGLVFTGSADGTVKVWRRelqgkgTKHFFSQTLL 391
           555555555.5**************************************.88888889998865.5689****************8766666666666668 PP
   S: 177  gghtdsvyslsfdsngkelvsgsldgtvklwdlq.tgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlr 252
           + ++ +++ l+++++ +++  gs dg v++w+ + + +    ++gh+  ++++ +   +++++sgs+D  i++W +r
   Q: 392  K-QECAITALAVNPEATFVYCGSSDGLVNFWEREnHLSHGGVMRGHKLAILCLVAA--GNLVISGSADMGISVW-KR 464
           8.*******************************96334457899************..****************.45 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MNSISNDNME TIPAKHPSKL PGKKEKRNSS LFNLSLYSFG FLYSSLGNRI FLRFPLVPFI 60
LHLLVSLVLW FTFSLDCLSP LLFIFFMESI RGRKRGGRIF LEQTSSVGQK FGRLKNSVST 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATAATCCAAC TGGATATATG AACTCGATCT CAAATGACAA CATGGAAACA ATCCCAGCGA 60
AACATCCATC AAAACTACCC GGCAAAAAGG AAAAACGAAA TTCTTCCTTG TTTAATTTGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0016021--C:integral component of membrane

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-007546	Arabidopsis thaliana	70.54	9.00e-168	582.00
IUUC-Bra-018078	Brassica rapa	66.67	2.00e-161	561.00
IUUC-Cin-025279	Ciona intestinalis	26.85	1.00e-19	90.50
IUUC-Gma-043117	Glycine max	59.96	2.00e-157	548.00
IUUC-Mtr-057896	Medicago truncatula	59.41	1.00e-161	562.00
IUUC-Mac-065282	Musa acuminata	55.71	2.00e-110	391.00
IUUC-Ome-081447	Oryza meridionalis	54.00	7.00e-104	370.00
IUUC-Pop-099710	Populus trichocarpa	77.07	2.00e-169	587.00
IUUC-Ppe-101450	Prunus persica	67.80	4.00e-175	606.00
IUUC-Sly-111339	Solanum lycopersicum	63.04	9.00e-161	558.00
IUUC-Stu-112836	Solanum tuberosum	60.76	4.00e-161	560.00
IUUC-Tae-123171	Triticum aestivum	52.39	8.00e-118	416.00
IUUC-Vvi-131677	Vitis vinifera	71.13	5.00e-169	586.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence