iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Smo-108857

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Ubiquitin-protein ligase, PUB2

Genbank Nucleotide ID

GL377701

Gene Name

PUB2-2; SELMODRAFT_448784

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SELMODRAFT_448784	EFJ06446	EFJ06446

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	3.20e-30	104.7	239	310

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceens 73
           +p++f+Cp+s +lM+dPv+++sG+ty+r++I++w+++g++tcP+t+q +++++l+Pn+t+++li +wce ++
   Q: 239  IPADFCCPLSQQLMSDPVIVASGQTYERAYIQQWVDRGNRTCPKTQQVISHTNLIPNYTVKALIANWCEMHN 310
           8*******************************************************************9987 PP

Organism

Selaginella moellendorffii

Protein Sequence
(Fasta)

MVMEDEVILT DVSDSMHMLL LARESVKFQR SSVHSLLARI KMLKPAVDYL REVKIPLPKP 60
ALAPFQSLNS VLLRARDAVE ECSVGRSKIF LIYRCHEIVV GFQEIAGDMC RVIETIPLSS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGTGATGG AGGACGAGGT GATCCTCACG GATGTGTCGG ATTCCATGCA CATGCTGCTG 60
CTGGCTCGAG AGAGCGTCAA ATTCCAGCGA TCCAGCGTCC ATAGCCTGCT CGCTCGCATC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0436--Ligase
KW-1185--Reference proteome

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR011987--ATPase_V1-cplx_hsu_C
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0016874--F:ligase activity
GO:0004842--F:ubiquitin-protein transferase activity

KEGG

smo:SELMODRAFT_448784

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005938	Arabidopsis lyrata	40.40	4.00e-109	387.00
IUUC-Bdi-014197	Brachypodium distachyon	60.63	6.00e-88	318.00
IUUC-Bra-018101	Brassica rapa	41.98	4.00e-88	318.00
IUUC-Csv-026196	Ciona savignyi	25.00	3.00e-10	60.80
IUUC-Gma-043739	Glycine max	60.07	2.00e-93	336.00
IUUC-Hvu-047089	Hordeum vulgare	52.49	2.00e-93	336.00
IUUC-Ppa-095522	Physcomitrella patens	64.26	1.00e-103	370.00
IUUC-Sit-110349	Setaria italica	52.91	3.00e-88	319.00
IUUC-Sly-111082	Solanum lycopersicum	61.32	2.00e-94	339.00
IUUC-Sbi-114085	Sorghum bicolor	60.98	2.00e-86	312.00
IUUC-Ssc-116061	Sus scrofa	27.39	3.00e-13	70.90
IUUC-Tca-121129	Theobroma cacao	53.56	7.00e-92	331.00
IUUC-Tae-125641	Triticum aestivum	52.76	3.00e-93	335.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence