iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Atr-002532

Ensembl Protein ID

ERN16064

UniProt Accession

U5D0X3; U5D0X3_AMBTC

Genbank Protein ID

ERN16064.1

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

KI392485

Gene Name

AMTR_s00030p00130440

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AMTR_s00030p00130440	ERN16064	ERN16064

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	3.20e-30	104.4	11	83

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           +p +f+CpIsl++M+ Pv l++G+tydrssI+kw+++g++tcP t+q l+ ++++Pn+tl+rli+ w e+n++
   Q: 11   IPTFFKCPISLDIMKSPVSLCTGVTYDRSSIQKWIDNGNNTCPATNQVLQTKEFIPNHTLQRLIKIWTESNQN 83
           89*******************************************************************9986 PP

Organism

Amborella trichopoda

Protein Sequence
(Fasta)

MVKKNNLCIT IPTFFKCPIS LDIMKSPVSL CTGVTYDRSS IQKWIDNGNN TCPATNQVLQ 60
TKEFIPNHTL QRLIKIWTES NQNPNPSDAG HFPSSPGPLE PRQIQGIVED IKNGVMISSE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGTGAAGA AGAATAACCT GTGCATCACA ATCCCAACGT TCTTCAAATG CCCAATTTCA 60
TTGGACATAA TGAAATCGCC TGTGAGTCTA TGCACTGGCG TCACCTACGA TCGATCGAGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

atr:18444362

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005744	Arabidopsis lyrata	45.26	2.00e-88	318.00
IUUC-Ath-007332	Arabidopsis thaliana	42.08	5.00e-87	313.00
IUUC-Bdi-014371	Brachypodium distachyon	35.43	3.00e-36	144.00
IUUC-Bol-015831	Brassica oleracea	41.84	3.00e-91	327.00
IUUC-Bra-017320	Brassica rapa	43.50	4.00e-89	320.00
IUUC-Gma-042668	Glycine max	50.00	2.00e-106	377.00
IUUC-Mtr-057795	Medicago truncatula	49.76	3.00e-109	387.00
IUUC-Mac-064700	Musa acuminata	32.71	3.00e-49	187.00
IUUC-Ogu-078852	Oryza glumaepatula	43.20	1.00e-36	145.00
IUUC-Oin-079861	Oryza indica	43.20	1.00e-36	146.00
IUUC-Ome-081099	Oryza meridionalis	44.85	4.00e-38	150.00
IUUC-Oni-083066	Oryza nivara	43.20	1.00e-36	146.00
IUUC-Opu-083818	Oryza punctata	41.76	4.00e-33	134.00
IUUC-Oru-085038	Oryza rufipogon	43.37	3.00e-34	138.00
IUUC-Osa-086178	Oryza sativa	43.64	1.00e-35	143.00
IUUC-Pop-099916	Populus trichocarpa	47.13	2.00e-103	368.00
IUUC-Ppe-101668	Prunus persica	46.50	7.00e-101	359.00
IUUC-Smo-109682	Selaginella moellendorffii	31.55	2.00e-47	182.00
IUUC-Sit-110583	Setaria italica	44.31	1.00e-35	142.00
IUUC-Sly-111549	Solanum lycopersicum	43.16	6.00e-93	333.00
IUUC-Stu-112738	Solanum tuberosum	43.47	4.00e-93	333.00
IUUC-Sbi-114135	Sorghum bicolor	58.23	3.00e-26	111.00
IUUC-Tca-121270	Theobroma cacao	47.84	1.00e-97	348.00
IUUC-Tae-123322	Triticum aestivum	43.36	2.00e-33	135.00
IUUC-Vvi-131751	Vitis vinifera	50.12	2.00e-113	401.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence