iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d025375	Zm00001d025375_T006	Zm00001d025375_T006
Zm00001d025375	Zm00001d025375_T007	Zm00001d025375_T007
Zm00001d025375	Zm00001d025375_T002	Zm00001d025375_T002

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.90e-24	84.4	387	417

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 5    svtclaf...sdtllvsGsdDgtikvWDlrt 32
            vtc++f   +++++ sGs Dg++++WD+ +
   Q: 387  IVTCVQFnpiDEKYFMSGSLDGKVRIWDVLD 417
           59******9777****************865 PP

Organism

Zea mays

Protein Sequence
(Fasta)

MPRSESDSDD VFFDAFEDVL SAGEPSFSED CSTSDEVSGP MKLEYEIWAN EPISVQERRQ 60
RFLKGMRLDD FVSTRIGSFQ CHGEITAVES STDMEERTVS GLSSGDSSVC DNESDFDGAC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGGCGCAGAG AGAGAGAGAG GAGTTACGCC CCTACGCCTG CGGTGCGCAG ATGCAGGAGA 60
CAAAATAGGA GGCGGCGCCC GCCGGCAGGC CCCCCCCTGC TCCTCCCCTT CCCGCTTTCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001059	Aegilops tauschii	65.77	0.00e+00	868.00
IUUC-Bdi-014701	Brachypodium distachyon	68.11	0.00e+00	860.00
IUUC-Hvu-047751	Hordeum vulgare	66.42	0.00e+00	877.00
IUUC-Lpe-051471	Leersia perrieri	64.60	0.00e+00	806.00
IUUC-Mtr-057957	Medicago truncatula	38.13	1.00e-108	386.00
IUUC-Mac-064487	Musa acuminata	44.75	5.00e-146	511.00
IUUC-Oba-075261	Oryza barthii	63.90	0.00e+00	773.00
IUUC-Obr-076501	Oryza brachyantha	64.58	0.00e+00	816.00
IUUC-Ogl-077292	Oryza glaberrima	63.90	0.00e+00	773.00
IUUC-Ogu-079011	Oryza glumaepatula	64.05	0.00e+00	775.00
IUUC-Oin-079603	Oryza indica	63.90	0.00e+00	774.00
IUUC-Olo-080221	Oryza longistaminata	64.34	0.00e+00	788.00
IUUC-Ome-081846	Oryza meridionalis	62.07	0.00e+00	743.00
IUUC-Oni-082883	Oryza nivara	63.90	0.00e+00	774.00
IUUC-Opu-083467	Oryza punctata	64.02	0.00e+00	793.00
IUUC-Oru-084692	Oryza rufipogon	64.05	0.00e+00	775.00
IUUC-Osa-085979	Oryza sativa	64.19	0.00e+00	776.00
IUUC-Sit-110631	Setaria italica	81.63	0.00e+00	1104.00
IUUC-Sbi-114736	Sorghum bicolor	85.80	0.00e+00	1104.00
IUUC-Tca-121743	Theobroma cacao	38.40	6.00e-116	410.00
IUUC-Tae-124128	Triticum aestivum	66.62	0.00e+00	877.00
IUUC-Tur-126370	Triticum urartu	64.83	0.00e+00	771.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence