iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ogu-078726

Ensembl Protein ID

OGLUM04G13170.1

UniProt Accession

A0A0D9ZL27; A0A0D9ZL27_9ORYZ

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OGLUM04G13170	OGLUM04G13170.1	OGLUM04G13170.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	2.80e-31	108.5	3	75

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqpl.teedlvPnltlrrliqawceens 73
           +p+ f+CpIsl++++dPv+l++G+tydr +Ie+wla g++tcPvt+qpl + + lvPn tlr+li++w+++ +
   Q: 3    IPHLFRCPISLDIFTDPVTLCTGQTYDRPCIERWLAAGHRTCPVTMQPLgDATALVPNRTLRHLIERWLSTDQ 75
           899**********************************************889999**************9976 PP

Organism

Oryza glumaepatula

Protein Sequence
(Fasta)

MSIPHLFRCP ISLDIFTDPV TLCTGQTYDR PCIERWLAAG HRTCPVTMQP LGDATALVPN 60
RTLRHLIERW LSTDQHHHHH LPEPAAPAAE AEADAEEPSL AALKRCLQQP DSAGAGKAKV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTGCTGCTGG TCTCTTTGAG GAGCTCTTGA TTCGGTATGA TTTGATGTGT ATTTTAGCTT 60
CTCGATGATC TGTTCTATCG ATGCGCTTTG AGTTGTGATT GTTTAAATGT TTGTGTTTGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002561	Amborella trichopoda	35.41	5.00e-48	184.00
IUUC-Bdi-014442	Brachypodium distachyon	61.96	7.00e-91	326.00
IUUC-Gma-043244	Glycine max	36.56	2.00e-57	215.00
IUUC-Hvu-047433	Hordeum vulgare	70.55	2.00e-56	210.00
IUUC-Lpe-051453	Leersia perrieri	72.50	2.00e-77	281.00
IUUC-Mtr-058668	Medicago truncatula	36.85	2.00e-55	209.00
IUUC-Mac-064799	Musa acuminata	47.36	5.00e-67	247.00
IUUC-Oba-075982	Oryza barthii	100.00	4.00e-44	169.00
IUUC-Ogl-077204	Oryza glaberrima	98.78	1.00e-122	432.00
IUUC-Oin-079338	Oryza indica	98.63	6.00e-91	327.00
IUUC-Ome-081303	Oryza meridionalis	88.78	4.00e-136	477.00
IUUC-Oni-082692	Oryza nivara	98.04	5.00e-130	457.00
IUUC-Opu-083613	Oryza punctata	85.09	3.00e-137	480.00
IUUC-Oru-084341	Oryza rufipogon	98.04	4.00e-129	453.00
IUUC-Osa-086241	Oryza sativa	97.80	8.00e-135	473.00
IUUC-Pop-099942	Populus trichocarpa	38.73	2.00e-57	216.00
IUUC-Ppe-101486	Prunus persica	39.73	5.00e-55	207.00
IUUC-Sit-110225	Setaria italica	71.60	7.00e-86	310.00
IUUC-Sly-111154	Solanum lycopersicum	38.17	1.00e-64	239.00
IUUC-Stu-112583	Solanum tuberosum	37.94	2.00e-65	242.00
IUUC-Sbi-114119	Sorghum bicolor	71.23	3.00e-97	348.00
IUUC-Tca-121526	Theobroma cacao	36.71	6.00e-45	173.00
IUUC-Tae-122999	Triticum aestivum	67.09	2.00e-106	378.00
IUUC-Tur-126273	Triticum urartu	69.12	5.00e-22	98.20
IUUC-Vvi-131284	Vitis vinifera	43.53	3.00e-65	241.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence