iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ome-081303

Ensembl Protein ID

OMERI04G11980.1

UniProt Accession

A0A0E0DEJ9; A0A0E0DEJ9_9ORYZ

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OMERI04G11980	OMERI04G11980.1	OMERI04G11980.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	2.60e-31	108.5	10	82

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqpl.teedlvPnltlrrliqawceens 73
           +p+ f+CpIsl++++dPv+l++G+tydr +Ie+wla g++tcPvt+qpl + + lvPn tlr+li++w+++ +
   Q: 10   IPHLFRCPISLDIFTDPVTLCTGQTYDRPCIERWLAAGHRTCPVTMQPLgDATALVPNRTLRHLIERWLSTDQ 82
           899**********************************************889999**************9976 PP

Organism

Oryza meridionalis

Protein Sequence
(Fasta)

MADWRRDMSI PHLFRCPISL DIFTDPVTLC TGQTYDRPCI ERWLAAGHRT CPVTMQPLGD 60
ATALVPNRTL RHLIERWLST DQHHHHLPEP PAAAAAAEAE ADAEEPSLAA LKRCLQQPDA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCAGGTC AGGATCTTCC CAAGTTACAA ACTTGGTGGT AGACAATTCT TAGTCTTACA 60
TAGTATGCTT CAACCAAAAT AAAAAGTCAT AATTAACTAT GCAATTTGCG CAAATGATCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002561	Amborella trichopoda	35.77	2.00e-42	166.00
IUUC-Bdi-014442	Brachypodium distachyon	61.36	5.00e-88	317.00
IUUC-Gma-043244	Glycine max	36.19	2.00e-52	199.00
IUUC-Hvu-047433	Hordeum vulgare	70.99	1.00e-55	208.00
IUUC-Lpe-051453	Leersia perrieri	73.33	2.00e-77	281.00
IUUC-Mtr-058668	Medicago truncatula	35.81	1.00e-49	189.00
IUUC-Mac-064799	Musa acuminata	47.59	4.00e-62	231.00
IUUC-Oba-075982	Oryza barthii	92.77	5.00e-44	169.00
IUUC-Ogl-077204	Oryza glaberrima	93.41	3.00e-114	404.00
IUUC-Ogu-078726	Oryza glumaepatula	92.20	5.00e-118	416.00
IUUC-Oin-079338	Oryza indica	93.64	3.00e-84	304.00
IUUC-Oni-082692	Oryza nivara	92.23	9.00e-122	429.00
IUUC-Opu-083613	Oryza punctata	86.70	2.00e-134	471.00
IUUC-Oru-084341	Oryza rufipogon	92.23	7.00e-121	426.00
IUUC-Osa-086241	Oryza sativa	92.93	5.00e-125	440.00
IUUC-Pop-099942	Populus trichocarpa	37.53	1.00e-51	196.00
IUUC-Ppe-101486	Prunus persica	37.21	1.00e-49	189.00
IUUC-Sit-110225	Setaria italica	72.34	1.00e-82	298.00
IUUC-Sly-111154	Solanum lycopersicum	36.45	5.00e-59	220.00
IUUC-Stu-112583	Solanum tuberosum	36.21	2.00e-59	221.00
IUUC-Sbi-114119	Sorghum bicolor	69.53	5.00e-94	337.00
IUUC-Tca-121526	Theobroma cacao	34.60	5.00e-44	170.00
IUUC-Tae-122999	Triticum aestivum	69.74	6.00e-101	360.00
IUUC-Tur-126273	Triticum urartu	69.12	7.00e-22	97.40
IUUC-Vvi-131284	Vitis vinifera	43.23	9.00e-61	226.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence