iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mla-059149

Ensembl Protein ID

EGG06830

UniProt Accession

F4RL26; F4RL26_MELLP

Genbank Protein ID

EGG06830.1

Protein Name

Ribosome biogenesis protein ERB1; Eukaryotic ribosome biogenesis protein 1

Genbank Nucleotide ID

GL883106

Gene Name

ERB1; MELLADRAFT_35909

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MELLADRAFT_35909	EGG06830	EGG06830

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.90e-08	32.7	321	354

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 4    dsvtclaf.sd.tllvsGsdDgtikvWDlrtgvl 35
           ++v+ ++  ++   +++Gs +g i +W+ + g++
   Q: 321  SKVRTVSIdPTgMWVATGSENGEILIWECKIGRC 354
           568888889775779*************887776 PP

Organism

Melampsora laricipopulina

Functional Description
(View)

Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.

Protein Sequence
(Fasta)

MKRAKTKPSK FVDGTSIQVW DDIVPGYGSE SSTEDAPNRI GNIPAHFYDD MPHIGYDIEG 60
KKIMRPAKGD ELDKFLAGVE DPTAWTSVED KLLHKNVQLT DAELDLIHKL AKAENPDAEF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAAAAGAG CTAAGACTAA ACCTTCTAAA TTTGTCGATG GTACTTCTAT TCAAGTTTGG 60
GATGATATTG TACCGGGTTA TGGTAGTGAA AGTTCGACGG AAGATGTAAG TCTTCTCCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0690--Ribosome biogenesis
KW-0698--rRNA processing
KW-0853--WD repeat

Interpro

IPR028598--BOP1/Erb1
IPR012953--BOP1_N_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08145--BOP1NT
PF00400--WD40

SMART

SM01035--BOP1NT
SM00320--WD40

Gene Ontology

GO:0005654--C:nucleoplasm
GO:0070545--C:PeBoW complex
GO:0030687--C:preribosome, large subunit precursor
GO:0070180--F:large ribosomal subunit rRNA binding
GO:0043021--F:ribonucleoprotein complex binding
GO:0000466--P:maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000463--P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

KEGG

mlr:MELLADRAFT_35909

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001158	Aegilops tauschii	39.60	4.00e-113	400.00
IUUC-Aml-001507	Ailuropoda melanoleuca	43.77	1.00e-147	514.00
IUUC-Atr-003141	Amborella trichopoda	40.09	9.00e-79	285.00
IUUC-Apl-003545	Anas platyrhynchos	43.46	6.00e-137	478.00
IUUC-Aly-005649	Arabidopsis lyrata	43.31	2.00e-142	497.00
IUUC-Ath-007625	Arabidopsis thaliana	43.31	2.00e-136	477.00
IUUC-Ago-007958	Ashbya gossypii	48.61	0.00e+00	644.00
IUUC-Acl-008344	Aspergillus clavatus	48.90	9.00e-166	575.00
IUUC-Afl-008616	Aspergillus flavus	49.26	4.00e-170	589.00
IUUC-Afu-009083	Aspergillus fumigatus	49.71	1.00e-163	568.00
IUUC-Ani-009365	Aspergillus nidulans	48.68	7.00e-171	592.00
IUUC-Ang-009796	Aspergillus niger	48.68	5.00e-165	572.00
IUUC-Aor-010015	Aspergillus oryzae	49.26	4.00e-170	589.00
IUUC-Ate-010537	Aspergillus terreus	49.48	6.00e-172	595.00
IUUC-Ame-011767	Astyanax mexicanus	52.99	4.00e-74	268.00
IUUC-Bgr-012286	Blumeria graminis	51.05	7.00e-178	615.00
IUUC-Bta-013569	Bos taurus	45.37	7.00e-155	538.00
IUUC-Bci-013820	Botrytis cinerea	48.43	2.00e-167	580.00
IUUC-Bdi-014477	Brachypodium distachyon	42.83	1.00e-137	481.00
IUUC-Bol-016099	Brassica oleracea	43.95	3.00e-142	496.00
IUUC-Bra-017174	Brassica rapa	43.79	7.00e-142	496.00
IUUC-Cel-018201	Caenorhabditis elegans	40.06	4.00e-124	436.00
IUUC-Cja-019009	Callithrix jacchus	38.85	1.00e-129	454.00
IUUC-Cfa-020173	Canis familiaris	42.02	1.00e-144	504.00
IUUC-Cpo-021796	Cavia porcellus	45.85	5.00e-155	539.00
IUUC-Cre-022650	Chlamydomonas reinhardtii	41.98	1.00e-140	491.00
IUUC-Csa-023440	Chlorocebus sabaeus	45.21	6.00e-162	562.00
IUUC-Cin-025782	Ciona intestinalis	44.60	3.00e-157	546.00
IUUC-Csv-026352	Ciona savignyi	43.38	6.00e-153	532.00
IUUC-Cgl-026393	Colletotrichum gloeosporioides	43.33	1.00e-126	445.00
IUUC-Cne-027004	Cryptococcus neoformans	58.37	0.00e+00	825.00
IUUC-Cme-027242	Cyanidioschyzon merolae	36.38	6.00e-121	426.00
IUUC-Dre-028658	Danio rerio	45.20	3.00e-162	563.00
IUUC-Dno-028883	Dasypus novemcinctus	43.74	8.00e-158	548.00
IUUC-Dor-031031	Dipodomys ordii	44.67	2.00e-160	557.00
IUUC-Dse-031443	Dothistroma septosporum	47.55	2.00e-174	603.00
IUUC-Dme-031786	Drosophila melanogaster	41.97	9.00e-155	538.00
IUUC-Eca-033677	Equus caballus	46.01	1.00e-159	554.00
IUUC-Eeu-035310	Erinaceus europaeus	42.07	1.00e-120	424.00
IUUC-Fca-035888	Felis catus	44.34	1.00e-159	554.00
IUUC-Fal-037438	Ficedula albicollis	42.63	4.00e-123	432.00
IUUC-Fox-037973	Fusarium oxysporum	47.53	7.00e-175	605.00
IUUC-Fso-038187	Fusarium solani	47.48	9.00e-175	605.00
IUUC-Gmo-039114	Gadus morhua	41.54	9.00e-143	498.00
IUUC-Ggr-039746	Gaeumannomyces graminis	47.75	5.00e-178	615.00
IUUC-Gga-040631	Gallus gallus	44.87	1.00e-89	320.00
IUUC-Gac-042582	Gasterosteus aculeatus	43.08	3.00e-151	526.00
IUUC-Gma-044307	Glycine max	43.74	3.00e-134	470.00
IUUC-Ggo-045587	Gorilla gorilla	45.40	1.00e-163	567.00
IUUC-Hsa-046319	Homo sapiens	45.53	2.00e-163	567.00
IUUC-Hvu-047526	Hordeum vulgare	42.61	7.00e-131	459.00
IUUC-Itr-048683	Ictidomys tridecemlineatus	45.37	2.00e-158	550.00
IUUC-Kpa-049221	Komagataella pastoris	44.75	2.00e-167	580.00
IUUC-Lch-049640	Latimeria chalumnae	44.57	3.00e-168	583.00
IUUC-Lpe-051135	Leersia perrieri	40.44	3.00e-124	436.00
IUUC-Loc-051930	Lepisosteus oculatus	46.98	7.00e-172	595.00
IUUC-Lma-053290	Leptosphaeria maculans	47.58	4.00e-175	606.00
IUUC-Laf-053903	Loxodonta africana	41.85	1.00e-133	468.00
IUUC-Mcc-055471	Macaca mulatta	45.05	2.00e-161	560.00
IUUC-Meu-056190	Macropus eugenii	45.31	2.00e-157	547.00
IUUC-Mor-057135	Magnaporthe oryzae	47.18	2.00e-167	580.00
IUUC-Mpo-057475	Magnaporthe poae	47.31	1.00e-165	575.00
IUUC-Mtr-058689	Medicago truncatula	41.19	2.00e-119	421.00
IUUC-Mga-059645	Meleagris gallopavo	40.89	8.00e-54	201.00
IUUC-Mvi-060485	Microbotryum violaceum	60.59	0.00e+00	797.00
IUUC-Mmr-061674	Microcebus murinus	43.46	1.00e-155	541.00
IUUC-Mdo-062973	Monodelphis domestica	45.37	4.00e-164	569.00
IUUC-Mmu-064180	Mus musculus	44.57	6.00e-157	545.00
IUUC-Mac-064535	Musa acuminata	40.27	2.00e-85	308.00
IUUC-Mpu-066406	Mustela putorius furo	45.85	8.00e-162	561.00
IUUC-Mlu-067795	Myotis lucifugus	44.74	2.00e-151	527.00
IUUC-Nfi-068516	Neosartorya fischeri	49.71	1.00e-156	545.00
IUUC-Ncr-068767	Neurospora crassa	49.10	1.00e-163	568.00
IUUC-Opr-071084	Ochotona princeps	40.62	1.00e-57	214.00
IUUC-Ont-071614	Oreochromis niloticus	44.34	3.00e-163	566.00
IUUC-Oba-075980	Oryza barthii	41.08	9.00e-121	425.00
IUUC-Obr-076799	Oryza brachyantha	42.32	2.00e-136	477.00
IUUC-Ogl-077134	Oryza glaberrima	42.32	9.00e-131	458.00
IUUC-Ogu-078655	Oryza glumaepatula	40.60	2.00e-124	437.00
IUUC-Oin-079654	Oryza indica	42.32	9.00e-131	458.00
IUUC-Olo-080706	Oryza longistaminata	40.28	4.00e-122	429.00
IUUC-Ome-081716	Oryza meridionalis	43.23	6.00e-72	263.00
IUUC-Oni-082508	Oryza nivara	40.13	2.00e-121	427.00
IUUC-Opu-083707	Oryza punctata	40.13	5.00e-121	426.00
IUUC-Oru-084453	Oryza rufipogon	40.28	4.00e-122	429.00
IUUC-Osa-085811	Oryza sativa	42.16	1.00e-130	457.00
IUUC-Ola-087361	Oryzias latipes	46.61	2.00e-164	570.00
IUUC-Oga-088015	Otolemur garnettii	44.73	2.00e-163	567.00
IUUC-Oar-090058	Ovis aries	54.22	3.00e-53	201.00
IUUC-Ptr-090631	Pan troglodytes	47.79	1.00e-67	248.00
IUUC-Pan-092306	Papio anubis	45.30	5.00e-161	559.00
IUUC-Pma-094622	Petromyzon marinus	45.73	1.00e-173	600.00
IUUC-Pno-094794	Phaeosphaeria nodorum	46.11	5.00e-165	572.00
IUUC-Ppa-095528	Physcomitrella patens	42.50	7.00e-89	319.00
IUUC-Pfo-096682	Poecilia formosa	45.04	2.00e-165	574.00
IUUC-Pab-097939	Pongo abelii	45.12	1.00e-145	508.00
IUUC-Pop-099043	Populus trichocarpa	44.11	7.00e-128	448.00
IUUC-Pca-100333	Procavia capensis	43.81	3.00e-155	540.00
IUUC-Ppe-102078	Prunus persica	40.89	2.00e-126	444.00
IUUC-Pgr-103525	Puccinia graminis	77.68	0.00e+00	1069.00
IUUC-Ptt-103929	Puccinia triticina	77.23	0.00e+00	1039.00
IUUC-Pte-104029	Pyrenophora teres	49.70	0.00e+00	640.00
IUUC-Pyt-104446	Pyrenophora triticirepentis	49.40	0.00e+00	638.00
IUUC-Rno-105248	Rattus norvegicus	44.74	2.00e-158	550.00
IUUC-Sce-106381	Saccharomyces cerevisiae	48.41	0.00e+00	644.00
IUUC-Sha-106519	Sarcophilus harrisii	46.35	7.00e-166	575.00
IUUC-Sja-107908	Schizosaccharomyces japonicus	44.13	5.00e-154	536.00
IUUC-Spo-108071	Schizosaccharomyces pombe	44.16	1.00e-147	514.00
IUUC-Smo-109604	Selaginella moellendorffii	43.30	2.00e-137	481.00
IUUC-Sit-110551	Setaria italica	42.74	2.00e-131	461.00
IUUC-Sly-110970	Solanum lycopersicum	44.29	7.00e-75	272.00
IUUC-Stu-112593	Solanum tuberosum	43.77	6.00e-141	492.00
IUUC-Sar-113123	Sorex araneus	41.46	4.00e-70	255.00
IUUC-Sbi-113945	Sorghum bicolor	41.27	1.00e-132	464.00
IUUC-Sre-115188	Sporisorium reilianum	49.86	0.00e+00	690.00
IUUC-Ssc-115352	Sus scrofa	44.76	3.00e-157	546.00
IUUC-Tru-117685	Takifugu rubripes	45.37	6.00e-166	575.00
IUUC-Tni-119982	Tetraodon nigroviridis	44.99	1.00e-159	555.00
IUUC-Tca-121664	Theobroma cacao	44.65	1.00e-141	494.00
IUUC-Tre-122229	Trichoderma reesei	47.17	2.00e-150	524.00
IUUC-Tvi-122576	Trichoderma virens	46.93	6.00e-156	542.00
IUUC-Tae-124110	Triticum aestivum	42.11	9.00e-124	435.00
IUUC-Tur-126781	Triticum urartu	39.70	3.00e-108	384.00
IUUC-Tme-127080	Tuber melanosporum	54.71	0.00e+00	704.00
IUUC-Ttr-128514	Tursiops truncatus	40.39	2.00e-97	348.00
IUUC-Uma-129556	Ustilago maydis	50.65	0.00e+00	676.00
IUUC-Vda-129715	Verticillium dahliae	49.02	2.00e-168	583.00
IUUC-Vvi-131211	Vitis vinifera	44.48	3.00e-134	470.00
IUUC-Xma-133883	Xiphophorus maculatus	44.19	1.00e-159	555.00
IUUC-Yli-134438	Yarrowia lipolytica	44.23	3.00e-159	553.00
IUUC-Zma-135341	Zea mays	38.48	9.00e-74	269.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence