iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ome-081796

Ensembl Protein ID

OMERI02G16820.1

UniProt Accession

A0A0E0CKL9; A0A0E0CKL9_9ORYZ

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OMERI02G16820	OMERI02G16820.1	OMERI02G16820.1
OMERI02G16820	OMERI02G16820.2	OMERI02G16820.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	2.50e-32	111.7	80	152

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           vpe+flCpIs e+MrdPvvl+sG+tydr+ I++wl+ g++tcP t+q l+++ l+Pn+ +r++i +wc e+++
   Q: 80   VPEQFLCPISSEIMRDPVVLASGQTYDRRFIQEWLSAGNRTCPQTQQVLSNTILIPNHLVRSMIAQWCTEKGI 152
           8********************************************************************9876 PP

Organism

Oryza meridionalis

Protein Sequence
(Fasta)

MAKSTPAAAA PEEAAAALRL RLRRLVAAVT AGGGGGEEAF EEAASALAAL RDAELGPPPK 60
DRAGAGAERR RRGHAEAAAV PEQFLCPISS EIMRDPVVLA SGQTYDRRFI QEWLSAGNRT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTATGGTCCT ACCCTAATAT TGCATTTCAT TTACACGAAT AAAACTAGTA GCAATAACAA 60
AGAAAATAAA AAAAGCTCCA GCCGCCTACA AGTCTAGGAG AAGGTGATTT CAAAAAGAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006420	Arabidopsis lyrata	51.52	2.00e-114	405.00
IUUC-Ath-007457	Arabidopsis thaliana	51.02	6.00e-115	406.00
IUUC-Bdi-014069	Brachypodium distachyon	86.56	0.00e+00	659.00
IUUC-Bol-015764	Brassica oleracea	50.26	2.00e-109	388.00
IUUC-Bra-017759	Brassica rapa	50.77	5.00e-110	390.00
IUUC-Gma-043565	Glycine max	51.79	5.00e-106	377.00
IUUC-Lpe-050825	Leersia perrieri	94.56	0.00e+00	720.00
IUUC-Mtr-057877	Medicago truncatula	48.17	1.00e-107	382.00
IUUC-Mac-065616	Musa acuminata	67.09	1.00e-147	514.00
IUUC-Oba-075311	Oryza barthii	99.46	0.00e+00	723.00
IUUC-Obr-076232	Oryza brachyantha	95.96	0.00e+00	705.00
IUUC-Ogl-077647	Oryza glaberrima	98.77	0.00e+00	796.00
IUUC-Ogu-078448	Oryza glumaepatula	99.02	0.00e+00	798.00
IUUC-Oin-079693	Oryza indica	99.73	0.00e+00	724.00
IUUC-Olo-080462	Oryza longistaminata	99.48	0.00e+00	751.00
IUUC-Oni-082158	Oryza nivara	99.26	0.00e+00	800.00
IUUC-Opu-084131	Oryza punctata	98.44	0.00e+00	744.00
IUUC-Oru-084335	Oryza rufipogon	99.26	0.00e+00	800.00
IUUC-Osa-085556	Oryza sativa	99.26	0.00e+00	798.00
IUUC-Pop-099087	Populus trichocarpa	52.86	2.00e-111	394.00
IUUC-Ppe-101662	Prunus persica	54.66	1.00e-121	429.00
IUUC-Sit-110812	Setaria italica	81.20	0.00e+00	637.00
IUUC-Sly-110911	Solanum lycopersicum	51.57	2.00e-117	415.00
IUUC-Stu-112732	Solanum tuberosum	51.28	9.00e-119	419.00
IUUC-Sbi-114814	Sorghum bicolor	82.06	0.00e+00	671.00
IUUC-Tca-121080	Theobroma cacao	52.96	3.00e-123	434.00
IUUC-Vvi-131590	Vitis vinifera	54.50	7.00e-125	439.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence