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Tag Content
iUUCD ID IUUC-Tca-121725
Ensembl Protein ID EOX93948
UniProt Accession A0A061DVA5; A0A061DVA5_THECC
Genbank Protein ID EOX93948.1
Protein Name WD-repeat protein isoform 2
Genbank Nucleotide ID CM001879
Gene Name TCM_002958
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
TCM_002958 EOX93948 EOX93948
TCM_002958 EOX93947 EOX93947
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 1.30e-27 95.6 507 539
UBD/Beta-Prp 1.70e-61 209.0 546 783
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD

   S: 3    tdsvtclaf.sd.tllvsGsdDgtikvWDlrtg 33
    +++vtc++f sd +ll+s+++D+++ +W+++t
   Q: 507 NSKVTCCHFsSDgKLLASAGHDKKVVLWNMDTL 539
    789*******999****************9875 PP
   


   UBD/Beta-Prp

   S: 7    ghhksvitcvkfspdksllatgsrdgtikvwdvttgkl.lrslsgheaevtavkfspdgk.ilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfsps 105
    ++hk vit+v f p++s+lat+s d+++++wd+ ++++ ++ + gh+a+v +++f+p++ ++ + +D+ i+ w+l+t++c++ +kg +++v +f+p
   Q: 546 EEHKLVITDVRFRPNSSQLATASVDKSVRLWDIANPSFcVQAYNGHTAPVMSLDFHPKKTdLFCFCDNDNEIRYWNLNTFSCTRMFKGGTAQV---RFQPR 643
    689********************************99957777**************9877*****************************998...599*9 PP
   S: 106 gdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvkl 206
    +l+++ +d+++ ++d+e + ++gh+++vn+++++ +g++l+s s + v++W++++g+++++l++ ++ +s f+++ l+ ++ ++++l
   Q: 644 IGHLLAAVSDKVVSIFDVEADRQTF-SFQGHSEMVNYICWDANGDYLASVSH-SLVKVWSVASGECIQELSS-GGNQFHSCVFHPSYSTLLVIGGISSLEL 741
    999*****************99998.9**********************996.89***************99.9*************************** PP
   S: 207 wdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriW 249
    w++ +++ +t +h++ v+ ++ sp + ++s+s+D s+++W
   Q: 742 WNMAENK-SMTIPAHENIVSALAQSPVTGMVASASHDSSVKLW 783
    ***8776.99********************************* PP
   

Organism Theobroma cacao
Protein Sequence
(Fasta)
MAQSNWEADK MLDVYIHDYL LKRKLHASAK AFMTEGKVAT DPVAIDAPGG FLFEWWSVFW 60
DIFIARTNEK HSEAAAAYIE AQQIKAREQQ QLQMQQLQLM QNRNVQLQRR DSNHPALGGS 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Tca-121725|E3,WD_repeat;UBD,Beta-Prp|Theobroma cacao
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ATGGCGCAGA GTAATTGGGA AGCTGATAAG ATGTAAGAAT AGTTGTAAAA TTTATAGTTA 60
CAGCTTTTGT CTTTTGAAGT GATTATTTGA TTAACTAATT TTGAACTTGT TCACTGTCTT 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Tca-121725|E3,WD_repeat;UBD,Beta-Prp|Theobroma cacao
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR006594--LisH
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08513--LisH
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00667--LisH
SM00320--WD40

Orthology
iUUCD ID Species Identity E-value Score
IUUC-Gma-044268 Glycine max 67.85 0.00e+00 983.00
IUUC-Mtr-058727 Medicago truncatula 72.30 0.00e+00 1028.00
IUUC-Pop-099999 Populus trichocarpa 77.13 0.00e+00 1127.00
IUUC-Ppe-101584 Prunus persica 81.47 0.00e+00 1162.00
IUUC-Sly-111127 Solanum lycopersicum 71.93 0.00e+00 1045.00
IUUC-Stu-112404 Solanum tuberosum 73.04 0.00e+00 1046.00
Created Date 25-Jun-2017

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