iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099954

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Zinc finger family protein

Genbank Nucleotide ID

CM000338

Gene Name

POPTRDRAFT_551052; POPTR_0002s04080g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0002s04080	POPTR_0002s04080.1	POPTR_0002s04080.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.70e-08	34.5	122	164

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C +Cl++f+++  ++vlp C H+fh+dC+  w       + +++CPlCr
   Q: 122  CVVCLNEFQEQdmLRVLPnCSHAFHLDCIDIW------FQSNANCPLCR 164
           ********55545999999*************......999999****8 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MAPAHRQYYI HAFRNQQNLI YQQPSPTSDH AFPLLAIAVL SIMGTAFLLV GYYVFVNKCC 60
SNWNQFNLLR WFTVWRARRN EDSFIALSPT MWNRGLDESV IREIPTFQYR REEGRERSSC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCACCAG CACACAGACA ATACTACATT CATGCCTTCA GAAACCAGCA GAATCTTATC 60
TATCAACAAC CTTCCCCTAC TTCAGACCAT GCTTTCCCTC TATTAGCTAT TGCTGTGTTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0002s04080g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Gma-043231	Glycine max	57.49	9.00e-95	339.00
IUUC-Mtr-058398	Medicago truncatula	55.14	1.00e-97	348.00
IUUC-Sja-107946	Schizosaccharomyces japonicus	33.65	1.00e-11	63.20

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence