iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aly-006112

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

GL348717

Gene Name

TIR1; ARALYDRAFT_907876

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
scaffold_503580.1	scaffold_503580.1	scaffold_503580.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/SCF/F-box	98.46	0.00e+00	1186.00	IUUC-Ath-007305

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MQKRIALSFP EEVLEHVFSF IQLDKDRNSV SLVCKSWYEI ERWCRRKVFI GNCYAVSPAT 60
VIRRFPKVRS VELKGKPHFA DFNLVPDGWG GYVYPWIEAM SSSYTWLEEI RLKRMVVTDD 120

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Nucleotide Sequence
(Fasta)

TCTCGAGGTT ATTTGGGCGC AATGCAGAAG CGAATAGCCT TGTCGTTCCC AGAAGAGGTG 60
CTTGAGCATG TATTCTCGTT TATTCAGCTG GATAAGGATA GGAACTCAGT CTCTCTGGTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001810--F-box_dom
IPR032675--L_dom-like
IPR006553--Leu-rich_rpt_Cys-con_subtyp

Pfam

PF12937--F-box-like

SMART

SM00256--FBOX
SM00367--LRR_CC

Gene Ontology

GO:0019005--C:SCF ubiquitin ligase complex
GO:0010011--F:auxin binding
GO:0038198--F:auxin receptor activity
GO:0000822--F:inositol hexakisphosphate binding
GO:0016036--P:cellular response to phosphate starvation
GO:0010311--P:lateral root formation
GO:0010152--P:pollen maturation
GO:0048443--P:stamen development

KEGG

aly:ARALYDRAFT_907876

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-007305	Arabidopsis thaliana	98.46	0.00e+00	1186.00
IUUC-Bol-016359	Brassica oleracea	90.72	0.00e+00	1078.00
IUUC-Bra-016902	Brassica rapa	92.48	0.00e+00	1095.00
IUUC-Gga-041152	Gallus gallus	25.11	6.00e-09	55.10
IUUC-Gma-044228	Glycine max	80.31	0.00e+00	969.00
IUUC-Mtr-057747	Medicago truncatula	79.55	0.00e+00	967.00
IUUC-Mac-064464	Musa acuminata	65.16	0.00e+00	766.00
IUUC-Pop-099362	Populus trichocarpa	79.35	0.00e+00	950.00
IUUC-Ppe-101435	Prunus persica	80.86	0.00e+00	989.00
IUUC-Sit-110658	Setaria italica	62.54	0.00e+00	674.00
IUUC-Sly-111582	Solanum lycopersicum	78.72	0.00e+00	946.00
IUUC-Stu-112711	Solanum tuberosum	77.93	0.00e+00	946.00
IUUC-Tca-121407	Theobroma cacao	81.74	0.00e+00	1000.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence