iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sbi-114057

Ensembl Protein ID

Sb03g044990.1

UniProt Accession

C5XH35; C5XH35_SORBI

Genbank Protein ID

EES04163.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000762

Gene Name

SORBI_003G416400

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb03g044990	Sb03g044990.1	Sb03g044990.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.10e-11	44.4	278	316

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgt.ikvWDlrtgvllk 37
           Ht++v c+a+ +d +l++++s  gt +++++  +g+ll+
   Q: 278  HTSRVACFALsQDgRLIATASTKGTlVRIYNAAEGNLLQ 316
           ***********888*****************99888876 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MATPAAAPAP PNPNPVPDDP PLQQQHEEEE EESPEPEPET APTSLTTSID PTPSGGEESE 60
SDDSSSVSSA PSSAPAPAPA AAAAAAPSPA AKDLLHISFN QDYGCFAAGT KSGFRIYNCD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTGACCTCTA TCGCTAACCC TCAGCACCGC CCCAGCAGCC CCGTGACACG CAACCCTACC 60
TACCTCCCCG TTCTGCCCCT CGCCCCCACC CATGGCGACG CCAGCCGCCG CGCCGGCCCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005829--C:cytosol
GO:0005634--C:nucleus
GO:0006914--P:autophagy
GO:0050832--P:defense response to fungus
GO:0010150--P:leaf senescence
GO:0010508--P:positive regulation of autophagy
GO:0006979--P:response to oxidative stress
GO:0009651--P:response to salt stress
GO:0042594--P:response to starvation
GO:0009414--P:response to water deprivation

KEGG

sbi:SORBI_03g044990

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001087	Aegilops tauschii	70.08	4.00e-132	463.00
IUUC-Aly-006440	Arabidopsis lyrata	69.00	3.00e-134	470.00
IUUC-Ath-006629	Arabidopsis thaliana	71.99	1.00e-137	481.00
IUUC-Ago-007768	Ashbya gossypii	27.96	4.00e-23	101.00
IUUC-Bdi-014719	Brachypodium distachyon	89.01	0.00e+00	631.00
IUUC-Bol-015119	Brassica oleracea	72.30	2.00e-137	481.00
IUUC-Bra-017319	Brassica rapa	72.58	4.00e-138	483.00
IUUC-Cel-018503	Caenorhabditis elegans	28.65	2.00e-34	139.00
IUUC-Cre-022613	Chlamydomonas reinhardtii	30.36	2.00e-32	132.00
IUUC-Cho-024328	Choloepus hoffmanni	33.33	2.00e-32	132.00
IUUC-Cne-026947	Cryptococcus neoformans	30.99	2.00e-44	172.00
IUUC-Dor-030931	Dipodomys ordii	34.78	6.00e-50	190.00
IUUC-Ete-032303	Echinops telfairi	35.06	3.00e-46	177.00
IUUC-Fox-037797	Fusarium oxysporum	32.03	7.00e-37	147.00
IUUC-Gmo-038583	Gadus morhua	36.41	1.00e-53	202.00
IUUC-Gma-043639	Glycine max	67.95	3.00e-137	480.00
IUUC-Hvu-047374	Hordeum vulgare	88.95	0.00e+00	632.00
IUUC-Lpe-051251	Leersia perrieri	93.99	0.00e+00	654.00
IUUC-Lma-053076	Leptosphaeria maculans	32.86	8.00e-43	166.00
IUUC-Mtr-057850	Medicago truncatula	69.15	1.00e-137	481.00
IUUC-Mla-058885	Melampsora laricipopulina	36.43	3.00e-37	147.00
IUUC-Mac-064713	Musa acuminata	83.84	3.00e-143	499.00
IUUC-Ncr-068833	Neurospora crassa	34.78	2.00e-38	152.00
IUUC-Opr-070933	Ochotona princeps	41.89	8.00e-25	107.00
IUUC-Oan-073084	Ornithorhynchus anatinus	33.67	4.00e-33	135.00
IUUC-Oba-075529	Oryza barthii	92.20	0.00e+00	630.00
IUUC-Obr-076316	Oryza brachyantha	97.02	1.00e-166	577.00
IUUC-Ogl-077403	Oryza glaberrima	92.90	0.00e+00	649.00
IUUC-Ogu-078223	Oryza glumaepatula	92.90	0.00e+00	648.00
IUUC-Oin-079580	Oryza indica	92.90	0.00e+00	649.00
IUUC-Olo-080794	Oryza longistaminata	86.89	0.00e+00	637.00
IUUC-Ome-081736	Oryza meridionalis	92.20	0.00e+00	636.00
IUUC-Oni-082413	Oryza nivara	92.90	0.00e+00	648.00
IUUC-Opu-083356	Oryza punctata	93.99	0.00e+00	650.00
IUUC-Oru-084972	Oryza rufipogon	92.90	0.00e+00	649.00
IUUC-Osa-085644	Oryza sativa	92.90	0.00e+00	649.00
IUUC-Pma-094403	Petromyzon marinus	35.83	8.00e-53	199.00
IUUC-Pop-099760	Populus trichocarpa	72.85	6.00e-156	542.00
IUUC-Ppe-101963	Prunus persica	72.45	3.00e-138	483.00
IUUC-Pgr-103258	Puccinia graminis	33.64	8.00e-38	150.00
IUUC-Ptt-103915	Puccinia triticina	39.18	2.00e-36	145.00
IUUC-Sit-110655	Setaria italica	95.88	0.00e+00	665.00
IUUC-Sly-110866	Solanum lycopersicum	61.17	3.00e-125	441.00
IUUC-Stu-111954	Solanum tuberosum	68.42	3.00e-138	484.00
IUUC-Tsy-119533	Tarsius syrichta	36.97	8.00e-25	105.00
IUUC-Tca-121459	Theobroma cacao	71.97	9.00e-134	469.00
IUUC-Tae-124634	Triticum aestivum	88.47	0.00e+00	630.00
IUUC-Tur-126631	Triticum urartu	72.45	7.00e-137	479.00
IUUC-Vvi-131053	Vitis vinifera	71.35	5.00e-150	523.00
IUUC-Yli-134566	Yarrowia lipolytica	37.43	3.00e-48	184.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence