iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-131584

UUCD1 version

UUC-ViV-00362

Ensembl Protein ID

VIT_15s0046g00250.t01

UniProt Accession

D7UCV4; D7UCV4_VITVI

Genbank Protein ID

CBI40569.3

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

FN596755

Gene Name

VIT_15s0046g00250

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_15s0046g00250	VIT_15s0046g00250.t01	VIT_15s0046g00250.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.30e-14	52.7	1970	1999

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWD 29
           H +svt ++  ++  l+++Gs Dg +k+WD
   Q: 1970 HLGSVTKISTiPNtSLFLTGSKDGDVKLWD 1999
           999*****96666599************** PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MQDSITAVDL PGQLPLQFVK SDPIPPAPTP SQFAVDWLPD FAGLSWVAYG ASTLLVISHF 60
PSPLSSEEAL IGPIFRQVVE IAADESAAVS VVGWSPATPS VGELAVASGN CVCVFSHDSE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCAAGACT CAATCACAGC CGTAGATTTG CCCGGCCAGT TGCCTCTCCA ATTCGTCAAG 60
TCGGATCCAA TCCCACCGGC CCCGACCCCA TCCCAGTTTG CCGTCGATTG GCTGCCGGAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR022033--Rav1p_C
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12234--Rav1p_C
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0043291--C:RAVE complex
GO:0007035--P:vacuolar acidification
GO:0070072--P:vacuolar proton-transporting V-type ATPase complex assembly

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000362	Aegilops tauschii	54.10	5.00e-52	195.00
IUUC-Aml-001296	Ailuropoda melanoleuca	29.79	8.00e-40	159.00
IUUC-Atr-002754	Amborella trichopoda	64.66	0.00e+00	723.00
IUUC-Apl-003695	Anas platyrhynchos	36.25	1.00e-37	152.00
IUUC-Aca-004649	Anolis carolinensis	34.62	2.00e-39	159.00
IUUC-Aly-006404	Arabidopsis lyrata	47.30	0.00e+00	786.00
IUUC-Ath-006612	Arabidopsis thaliana	44.46	0.00e+00	816.00
IUUC-Afu-009077	Aspergillus fumigatus	27.85	1.00e-38	155.00
IUUC-Ani-009437	Aspergillus nidulans	29.33	2.00e-39	157.00
IUUC-Ang-009742	Aspergillus niger	29.74	4.00e-39	156.00
IUUC-Ame-010919	Astyanax mexicanus	31.61	2.00e-37	152.00
IUUC-Bta-013088	Bos taurus	32.97	7.00e-38	153.00
IUUC-Bdi-014471	Brachypodium distachyon	48.59	0.00e+00	627.00
IUUC-Bol-016375	Brassica oleracea	49.22	0.00e+00	790.00
IUUC-Bra-016630	Brassica rapa	49.32	0.00e+00	811.00
IUUC-Cel-018537	Caenorhabditis elegans	31.46	2.00e-28	122.00
IUUC-Cja-019137	Callithrix jacchus	35.50	1.00e-36	149.00
IUUC-Cfa-021089	Canis familiaris	29.17	6.00e-40	160.00
IUUC-Cpo-022459	Cavia porcellus	36.78	6.00e-38	153.00
IUUC-Csa-023972	Chlorocebus sabaeus	36.51	9.00e-38	153.00
IUUC-Cho-024762	Choloepus hoffmanni	36.10	3.00e-37	151.00
IUUC-Csv-026055	Ciona savignyi	33.12	4.00e-37	150.00
IUUC-Dre-028673	Danio rerio	37.19	1.00e-38	155.00
IUUC-Dno-029855	Dasypus novemcinctus	27.32	6.00e-31	130.00
IUUC-Dor-030381	Dipodomys ordii	32.26	4.00e-38	154.00
IUUC-Dme-031825	Drosophila melanogaster	36.50	2.00e-40	162.00
IUUC-Ete-033176	Echinops telfairi	36.40	5.00e-37	150.00
IUUC-Eca-033386	Equus caballus	36.51	2.00e-37	152.00
IUUC-Eeu-035011	Erinaceus europaeus	34.48	2.00e-35	145.00
IUUC-Fca-036411	Felis catus	28.99	2.00e-40	161.00
IUUC-Fal-037367	Ficedula albicollis	33.12	8.00e-38	153.00
IUUC-Gmo-038687	Gadus morhua	30.97	4.00e-36	147.00
IUUC-Gga-040765	Gallus gallus	36.25	8.00e-38	153.00
IUUC-Gac-041986	Gasterosteus aculeatus	29.38	1.00e-35	145.00
IUUC-Gma-044099	Glycine max	49.22	0.00e+00	929.00
IUUC-Ggo-045379	Gorilla gorilla	36.51	1.00e-37	152.00
IUUC-Hsa-046758	Homo sapiens	28.88	6.00e-41	163.00
IUUC-Hvu-047213	Hordeum vulgare	65.80	3.00e-120	423.00
IUUC-Itr-047982	Ictidomys tridecemlineatus	29.23	7.00e-41	163.00
IUUC-Lch-049469	Latimeria chalumnae	30.24	8.00e-42	166.00
IUUC-Lpe-051382	Leersia perrieri	42.65	0.00e+00	685.00
IUUC-Loc-052909	Lepisosteus oculatus	31.02	1.00e-39	159.00
IUUC-Laf-054102	Loxodonta africana	36.51	7.00e-38	153.00
IUUC-Mcc-055533	Macaca mulatta	36.10	2.00e-37	152.00
IUUC-Meu-056627	Macropus eugenii	32.51	3.00e-23	105.00
IUUC-Mtr-058725	Medicago truncatula	50.98	0.00e+00	934.00
IUUC-Mga-059386	Meleagris gallopavo	36.25	8.00e-38	153.00
IUUC-Mmr-061082	Microcebus murinus	29.40	2.00e-40	162.00
IUUC-Mdo-062837	Monodelphis domestica	29.30	3.00e-35	144.00
IUUC-Mmu-063808	Mus musculus	37.45	1.00e-39	159.00
IUUC-Mac-065224	Musa acuminata	61.53	0.00e+00	747.00
IUUC-Mpu-066054	Mustela putorius furo	29.40	1.00e-40	162.00
IUUC-Mlu-068235	Myotis lucifugus	36.51	1.00e-37	152.00
IUUC-Nfi-068420	Neosartorya fischeri	27.60	1.00e-37	151.00
IUUC-Nle-069401	Nomascus leucogenys	36.51	9.00e-38	153.00
IUUC-Opr-070543	Ochotona princeps	23.05	2.00e-17	85.90
IUUC-Ont-071658	Oreochromis niloticus	28.78	7.00e-37	150.00
IUUC-Ocu-074711	Oryctolagus cuniculus	29.70	1.00e-40	162.00
IUUC-Oba-075826	Oryza barthii	42.24	0.00e+00	688.00
IUUC-Obr-076145	Oryza brachyantha	40.33	0.00e+00	696.00
IUUC-Ogu-078307	Oryza glumaepatula	41.68	0.00e+00	676.00
IUUC-Oin-080118	Oryza indica	42.24	0.00e+00	669.00
IUUC-Olo-080848	Oryza longistaminata	40.43	0.00e+00	824.00
IUUC-Oni-082792	Oryza nivara	37.91	0.00e+00	751.00
IUUC-Opu-084153	Oryza punctata	38.20	0.00e+00	853.00
IUUC-Oru-084415	Oryza rufipogon	39.72	0.00e+00	875.00
IUUC-Osa-085332	Oryza sativa	56.06	0.00e+00	663.00
IUUC-Ola-087560	Oryzias latipes	27.31	1.00e-36	149.00
IUUC-Oga-088868	Otolemur garnettii	28.45	5.00e-40	160.00
IUUC-Oar-090063	Ovis aries	36.51	5.00e-38	154.00
IUUC-Ptr-091058	Pan troglodytes	36.51	1.00e-37	153.00
IUUC-Pan-091912	Papio anubis	36.36	8.00e-38	152.00
IUUC-Psi-093590	Pelodiscus sinensis	33.12	2.00e-37	152.00
IUUC-Ppa-095505	Physcomitrella patens	47.59	1.00e-123	438.00
IUUC-Pfo-097521	Poecilia formosa	28.39	7.00e-39	156.00
IUUC-Pab-098507	Pongo abelii	36.36	1.00e-37	152.00
IUUC-Pop-098812	Populus trichocarpa	57.61	0.00e+00	1045.00
IUUC-Pca-101008	Procavia capensis	35.93	5.00e-37	150.00
IUUC-Ppe-101610	Prunus persica	61.03	0.00e+00	1120.00
IUUC-Pva-102432	Pteropus vampyrus	29.63	9.00e-40	159.00
IUUC-Rno-105076	Rattus norvegicus	37.87	6.00e-40	160.00
IUUC-Sha-106955	Sarcophilus harrisii	35.86	1.00e-36	149.00
IUUC-Sja-107657	Schizosaccharomyces japonicus	33.21	2.00e-27	117.00
IUUC-Smo-109573	Selaginella moellendorffii	53.53	1.00e-132	465.00
IUUC-Sit-109981	Setaria italica	55.67	7.00e-174	603.00
IUUC-Sly-110968	Solanum lycopersicum	52.68	0.00e+00	917.00
IUUC-Stu-111939	Solanum tuberosum	76.76	1.00e-82	297.00
IUUC-Sar-113751	Sorex araneus	41.07	6.00e-20	94.00
IUUC-Sbi-113768	Sorghum bicolor	63.93	1.00e-66	244.00
IUUC-Ssc-116371	Sus scrofa	31.31	2.00e-37	152.00
IUUC-Tgu-117108	Taeniopygia guttata	32.81	9.00e-37	149.00
IUUC-Tru-118349	Takifugu rubripes	29.16	9.00e-39	156.00
IUUC-Tsy-118837	Tarsius syrichta	29.75	2.00e-34	142.00
IUUC-Tni-119924	Tetraodon nigroviridis	28.79	3.00e-36	148.00
IUUC-Tca-121789	Theobroma cacao	60.57	0.00e+00	1082.00
IUUC-Tae-125726	Triticum aestivum	54.10	0.00e+00	677.00
IUUC-Tur-126437	Triticum urartu	32.32	1.00e-92	333.00
IUUC-Tbe-127760	Tupaia belangeri	36.78	6.00e-39	157.00
IUUC-Ttr-128323	Tursiops truncatus	29.17	6.00e-40	160.00
IUUC-Vpa-130118	Vicugna pacos	41.32	3.00e-34	141.00
IUUC-Xtr-132638	Xenopus tropicalis	36.97	3.00e-37	151.00
IUUC-Xma-134022	Xiphophorus maculatus	28.54	2.00e-39	158.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence