iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-057646

Ensembl Protein ID

KEH18667

UniProt Accession

G8A2W4; G8A2W4_MEDTR

Genbank Protein ID

KEH18667.1

Protein Name

RING-H2 finger protein ATL21A, putative

Genbank Nucleotide ID

CM001224

Gene Name

MTR_8g027745

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_8g027745	KEH18667	KEH18667

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	6.40e-06	28.0	314	356

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C iCl ++  k+ +++ p C+H+fhadC+  w       + + +CP+Cr
   Q: 314  CWICLAEYnsKETVRCIPeCKHCFHADCIDEW------LRMNVTCPVCR 356
           9*****9998666999999*************......**********8 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MDILKVLFYL IFPVVYALND CPFSLCGNNS FLIRFPFQLG EQYPYCVYPG FNLSCTNDSK 60
TILKLPYSEE FYVRSINYLT QQIQLYDPDD CLPKRLLRLN FSNSPFIASF SRDYTFLGCS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGACATCT TGAAGGTCCT TTTTTACTTA ATCTTTCCTG TTGTATACGC CTTAAACGAT 60
TGCCCTTTTT CTTTGTGTGG CAACAATAGT TTCCTAATTC GTTTCCCCTT TCAATTAGGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0732--Signal
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR032872--WAK_assoc_C
IPR025287--WAK_GUB
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13947--GUB_WAK_bind
PF14380--WAK_assoc
PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0030247--F:polysaccharide binding
GO:0008270--F:zinc ion binding

KEGG

mtr:MTR_8g027745

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005946	Arabidopsis lyrata	45.69	2.00e-77	281.00
IUUC-Ath-007576	Arabidopsis thaliana	43.40	1.00e-73	269.00
IUUC-Bol-016430	Brassica oleracea	46.47	4.00e-75	275.00
IUUC-Bra-017148	Brassica rapa	47.44	4.00e-82	297.00
IUUC-Gma-043197	Glycine max	67.82	7.00e-140	489.00
IUUC-Pop-099388	Populus trichocarpa	50.93	1.00e-99	355.00
IUUC-Ppe-102079	Prunus persica	49.03	3.00e-101	361.00
IUUC-Sly-111740	Solanum lycopersicum	48.19	3.00e-79	288.00
IUUC-Stu-112029	Solanum tuberosum	49.30	3.00e-80	291.00
IUUC-Tca-121363	Theobroma cacao	53.85	2.00e-107	381.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence