iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d022378	Zm00001d022378_T017	Zm00001d022378_T017
Zm00001d022378	Zm00001d022378_T057	Zm00001d022378_T057
Zm00001d022378	Zm00001d022378_T062	Zm00001d022378_T062
Zm00001d022378	Zm00001d022378_T034	Zm00001d022378_T034
Zm00001d022378	Zm00001d022378_T097	Zm00001d022378_T097
Zm00001d022378	Zm00001d022378_T018	Zm00001d022378_T018
Zm00001d022378	Zm00001d022378_T072	Zm00001d022378_T072
Zm00001d022378	Zm00001d022378_T042	Zm00001d022378_T042
Zm00001d022378	Zm00001d022378_T112	Zm00001d022378_T112
Zm00001d022378	Zm00001d022378_T008	Zm00001d022378_T008
Zm00001d022378	Zm00001d022378_T080	Zm00001d022378_T080
Zm00001d022378	Zm00001d022378_T010	Zm00001d022378_T010
Zm00001d022378	Zm00001d022378_T040	Zm00001d022378_T040
Zm00001d022378	Zm00001d022378_T073	Zm00001d022378_T073
Zm00001d022378	Zm00001d022378_T100	Zm00001d022378_T100
Zm00001d022378	Zm00001d022378_T122	Zm00001d022378_T122
Zm00001d022378	Zm00001d022378_T028	Zm00001d022378_T028
Zm00001d022378	Zm00001d022378_T067	Zm00001d022378_T067
Zm00001d022378	Zm00001d022378_T052	Zm00001d022378_T052
Zm00001d022378	Zm00001d022378_T124	Zm00001d022378_T124
Zm00001d022378	Zm00001d022378_T098	Zm00001d022378_T098
Zm00001d022378	Zm00001d022378_T083	Zm00001d022378_T083
Zm00001d022378	Zm00001d022378_T002	Zm00001d022378_T002
Zm00001d022378	Zm00001d022378_T074	Zm00001d022378_T074
Zm00001d022378	Zm00001d022378_T059	Zm00001d022378_T059
Zm00001d022378

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.50e-21	76.4	123	157

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf....sdtllvsGsdDgtikvWDlrtg 33
           Ht++v++l+f    + ++l+sG+  g + +WDl+  
   Q: 123  HTGPVCGLEFseltP-NRLASGAEQGELCIWDLKNP 157
           **********99643.9***************9765 PP

Organism

Zea mays

Protein Sequence
(Fasta)

MACIKSAQRA ALTALAPDAP YLAAGTMTGA VDLSFSASAN IEIFRLDFQS DSPDLPLLAA 60
APSPDRFNRL SWSRPGAVEG DSFSLGLLAG GLSDGSVAVW NPLSLISSEG KAEDAMVARL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGCCGAAGGC TTCCAAATCA AGCGTCTCAG CACGCCAGGC AGGGTAAGCC GTAAGCGCAA 60
ACCCCCGCCC GATCAGATCC GCAGCGATTC GGCCAAGTCC CGAACGGCCG AACCCCTCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR024298--ACE1_Sec16_Sec31
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12931--Sec16_C
PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000990	Aegilops tauschii	67.70	0.00e+00	1300.00
IUUC-Atr-002489	Amborella trichopoda	68.73	4.00e-141	493.00
IUUC-Aly-005977	Arabidopsis lyrata	55.11	0.00e+00	1113.00
IUUC-Ath-007685	Arabidopsis thaliana	55.09	0.00e+00	1113.00
IUUC-Acl-008051	Aspergillus clavatus	30.47	9.00e-106	378.00
IUUC-Afl-008442	Aspergillus flavus	30.31	4.00e-101	362.00
IUUC-Afu-009123	Aspergillus fumigatus	30.73	1.00e-105	377.00
IUUC-Ani-009261	Aspergillus nidulans	30.12	4.00e-101	362.00
IUUC-Ang-009822	Aspergillus niger	30.62	1.00e-102	368.00
IUUC-Aor-010011	Aspergillus oryzae	29.67	7.00e-97	348.00
IUUC-Bdi-014514	Brachypodium distachyon	78.79	0.00e+00	1590.00
IUUC-Bol-015890	Brassica oleracea	55.20	0.00e+00	1094.00
IUUC-Bra-017330	Brassica rapa	54.34	0.00e+00	1078.00
IUUC-Cin-025764	Ciona intestinalis	30.61	9.00e-124	437.00
IUUC-Csv-025902	Ciona savignyi	31.48	3.00e-107	383.00
IUUC-Cme-027190	Cyanidioschyzon merolae	34.28	1.00e-56	215.00
IUUC-Ggr-039903	Gaeumannomyces graminis	29.42	4.00e-99	356.00
IUUC-Gma-043831	Glycine max	54.40	0.00e+00	1090.00
IUUC-Ggo-044594	Gorilla gorilla	28.75	9.00e-103	368.00
IUUC-Hvu-047106	Hordeum vulgare	73.93	0.00e+00	1489.00
IUUC-Itr-048539	Ictidomys tridecemlineatus	31.74	8.00e-103	368.00
IUUC-Kpa-049364	Komagataella pastoris	26.70	1.00e-74	275.00
IUUC-Lpe-051712	Leersia perrieri	74.02	0.00e+00	1490.00
IUUC-Lma-053135	Leptosphaeria maculans	30.79	4.00e-106	379.00
IUUC-Mpo-057504	Magnaporthe poae	28.84	3.00e-97	349.00
IUUC-Mtr-058313	Medicago truncatula	55.17	0.00e+00	1123.00
IUUC-Mac-065657	Musa acuminata	59.13	0.00e+00	1274.00
IUUC-Nfi-068529	Neosartorya fischeri	30.70	3.00e-105	376.00
IUUC-Oba-075929	Oryza barthii	80.23	0.00e+00	1661.00
IUUC-Obr-076078	Oryza brachyantha	81.70	0.00e+00	1705.00
IUUC-Ogl-077519	Oryza glaberrima	80.49	0.00e+00	1673.00
IUUC-Ogu-077980	Oryza glumaepatula	80.31	0.00e+00	1675.00
IUUC-Oin-079946	Oryza indica	80.31	0.00e+00	1680.00
IUUC-Olo-080277	Oryza longistaminata	70.87	0.00e+00	1393.00
IUUC-Ome-081551	Oryza meridionalis	79.00	0.00e+00	1635.00
IUUC-Oni-082399	Oryza nivara	80.31	0.00e+00	1677.00
IUUC-Opu-083645	Oryza punctata	78.81	0.00e+00	1628.00
IUUC-Oru-084591	Oryza rufipogon	79.00	0.00e+00	1633.00
IUUC-Osa-085698	Oryza sativa	80.58	0.00e+00	1687.00
IUUC-Pno-095056	Phaeosphaeria nodorum	29.79	2.00e-92	334.00
IUUC-Ppa-095535	Physcomitrella patens	45.61	0.00e+00	890.00
IUUC-Pop-099144	Populus trichocarpa	55.20	0.00e+00	969.00
IUUC-Ppe-101423	Prunus persica	55.31	0.00e+00	1021.00
IUUC-Pte-104145	Pyrenophora teres	30.95	2.00e-102	367.00
IUUC-Pyt-104813	Pyrenophora triticirepentis	31.43	1.00e-104	374.00
IUUC-Sit-110339	Setaria italica	83.63	0.00e+00	1720.00
IUUC-Sly-111112	Solanum lycopersicum	54.73	0.00e+00	1083.00
IUUC-Sbi-114012	Sorghum bicolor	90.92	0.00e+00	1849.00
IUUC-Tca-121760	Theobroma cacao	57.97	0.00e+00	1224.00
IUUC-Tre-122238	Trichoderma reesei	29.99	2.00e-104	373.00
IUUC-Tae-125709	Triticum aestivum	76.40	0.00e+00	1612.00
IUUC-Tur-126767	Triticum urartu	65.79	0.00e+00	1231.00
IUUC-Ttr-129290	Tursiops truncatus	33.27	1.00e-70	261.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence