iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Lpe-051613

Ensembl Protein ID

LPERR11G04400.2

UniProt Accession

A0A0D9XPQ9; A0A0D9XPQ9_9ORYZ

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
LPERR11G04400	LPERR11G04400.1	LPERR11G04400.1
LPERR11G04400	LPERR11G04400.2	LPERR11G04400.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.40e-14	53.2	272	304

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 6    vtclaf.sd.tllvsGsdDgtikvWDlrtgvll 36
           ++cl+f ++  l+ +Gs  g  ++WDlrt ++l
   Q: 272  IRCLSFsTSgQLIFAGSSAGYAHCWDLRTLRPL 304
           9*****94459*****************98876 PP

Organism

Leersia perrieri

Protein Sequence
(Fasta)

MEASSSRVRS GSGGRSAGVK RRRGNGGGGS GSGSTAQALN DDTLRSVFSR LDDHFDLARC 60
SAVCTTWNRI IDTAHLMRDL YYKRNPQARN SGSNISVKSY FKELALDEHA SSFSRGPAEV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGGCGA GCAGCAGCCG AGTCCGGAGC GGGAGCGGGG GCCGGAGCGC GGGAGTGAAG 60
CGCCGCAGGG GGAACGGCGG CGGCGGGTCG GGGTCGGGGT CGACGGCGCA GGCGCTGAAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR001810--F-box_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50294--WD_REPEATS_REGION

Pfam

PF12937--F-box-like
PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003151	Amborella trichopoda	43.87	2.00e-81	295.00
IUUC-Aly-005690	Arabidopsis lyrata	37.38	6.00e-87	313.00
IUUC-Ath-006699	Arabidopsis thaliana	37.70	2.00e-88	318.00
IUUC-Bdi-014108	Brachypodium distachyon	73.57	0.00e+00	635.00
IUUC-Bol-015377	Brassica oleracea	40.00	3.00e-92	331.00
IUUC-Bra-016934	Brassica rapa	42.72	5.00e-81	293.00
IUUC-Gma-043394	Glycine max	42.96	1.00e-88	319.00
IUUC-Mtr-057690	Medicago truncatula	42.54	2.00e-90	325.00
IUUC-Mac-064938	Musa acuminata	56.39	6.00e-103	366.00
IUUC-Oba-075418	Oryza barthii	86.96	0.00e+00	658.00
IUUC-Obr-076882	Oryza brachyantha	86.83	0.00e+00	738.00
IUUC-Ogl-077438	Oryza glaberrima	87.32	0.00e+00	739.00
IUUC-Ogu-078943	Oryza glumaepatula	87.80	0.00e+00	743.00
IUUC-Oin-079069	Oryza indica	87.56	0.00e+00	742.00
IUUC-Olo-080409	Oryza longistaminata	87.56	0.00e+00	722.00
IUUC-Oni-083056	Oryza nivara	87.07	0.00e+00	736.00
IUUC-Opu-084172	Oryza punctata	88.97	0.00e+00	748.00
IUUC-Oru-085030	Oryza rufipogon	87.32	0.00e+00	740.00
IUUC-Osa-085520	Oryza sativa	87.32	0.00e+00	740.00
IUUC-Ppa-095450	Physcomitrella patens	28.57	2.00e-34	139.00
IUUC-Pop-099796	Populus trichocarpa	43.86	7.00e-92	330.00
IUUC-Ppe-101252	Prunus persica	43.28	1.00e-90	326.00
IUUC-Smo-108718	Selaginella moellendorffii	29.73	6.00e-28	117.00
IUUC-Sit-109830	Setaria italica	79.66	0.00e+00	671.00
IUUC-Sly-111786	Solanum lycopersicum	44.15	3.00e-89	321.00
IUUC-Sbi-114102	Sorghum bicolor	80.64	0.00e+00	682.00
IUUC-Tca-121562	Theobroma cacao	45.39	8.00e-93	333.00
IUUC-Tae-123446	Triticum aestivum	73.67	0.00e+00	639.00
IUUC-Tur-126707	Triticum urartu	61.40	8.00e-145	506.00
IUUC-Vvi-131441	Vitis vinifera	46.86	9.00e-102	363.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence