iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121562

Ensembl Protein ID

EOX96618

UniProt Accession

A0A061E2X1; A0A061E2X1_THECC

Genbank Protein ID

EOX96618.1

Protein Name

F-box family protein with WD40/YVTN repeat doamin, putative isoform 1

Genbank Nucleotide ID

CM001879

Gene Name

TCM_005835

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_005835	EOX96618	EOX96618
TCM_005835	EOX96620	EOX96620

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.70e-11	44.8	240	270

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclafsd.tllvsGsdDgtikvWDlr 31
           H+++vtcl++sd +l++sGs  g++ + +l+
   Q: 240  HAGPVTCLSLSDdHLILSGSSLGSVSISNLS 270
           99********5559**********9986665 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MGPSPSAGSS ARRKRSGVSG GTRMERLDHD ILCIIFSFLN VFDLARCTAV CKSWNAVVKK 60
SELLQALYFK LRRDSMDNIS TESNSSRQSW QLGLEEAAMK HHSLSLRRGR IDIHQWKTHS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTTTAAGGCA AATTTTATGT CGGTTCTGCA AGCTGCTCAC TCACTACAGC AGGAAAACTA 60
TTGAAGCCTG AGCATGATAC ACAATGAATG TGCAACTAGC TGTAACTGTC GTTTTAGGAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR001810--F-box_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50181--FBOX
PS50294--WD_REPEATS_REGION

Pfam

PF12937--F-box-like

SMART

SM00256--FBOX
SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003151	Amborella trichopoda	52.69	3.00e-110	390.00
IUUC-Aly-005690	Arabidopsis lyrata	56.59	2.00e-136	478.00
IUUC-Ath-006699	Arabidopsis thaliana	56.38	3.00e-135	474.00
IUUC-Bdi-014108	Brachypodium distachyon	47.31	8.00e-109	386.00
IUUC-Bol-015377	Brassica oleracea	58.29	1.00e-141	495.00
IUUC-Bra-016934	Brassica rapa	61.79	3.00e-119	421.00
IUUC-Gma-043394	Glycine max	56.35	1.00e-137	481.00
IUUC-Lpe-051613	Leersia perrieri	45.39	1.00e-96	345.00
IUUC-Mtr-057690	Medicago truncatula	58.19	6.00e-133	466.00
IUUC-Mac-064938	Musa acuminata	58.25	5.00e-99	353.00
IUUC-Oba-075418	Oryza barthii	49.73	1.00e-99	355.00
IUUC-Obr-076882	Oryza brachyantha	48.69	1.00e-109	388.00
IUUC-Ogl-077438	Oryza glaberrima	49.76	2.00e-110	392.00
IUUC-Ogu-078943	Oryza glumaepatula	50.00	2.00e-110	392.00
IUUC-Oin-079069	Oryza indica	49.76	5.00e-110	390.00
IUUC-Olo-080409	Oryza longistaminata	45.02	4.00e-93	334.00
IUUC-Oni-083056	Oryza nivara	49.27	1.00e-108	385.00
IUUC-Opu-084172	Oryza punctata	49.51	1.00e-109	389.00
IUUC-Oru-085030	Oryza rufipogon	49.51	2.00e-109	388.00
IUUC-Osa-085520	Oryza sativa	49.51	2.00e-109	388.00
IUUC-Ppa-095450	Physcomitrella patens	28.25	4.00e-37	148.00
IUUC-Pop-099796	Populus trichocarpa	62.68	8.00e-142	496.00
IUUC-Ppe-101252	Prunus persica	64.15	8.00e-142	496.00
IUUC-Smo-109369	Selaginella moellendorffii	30.77	1.00e-29	122.00
IUUC-Sit-109830	Setaria italica	47.57	4.00e-107	380.00
IUUC-Sly-111786	Solanum lycopersicum	58.54	6.00e-127	446.00
IUUC-Sbi-114102	Sorghum bicolor	49.88	2.00e-112	398.00
IUUC-Tae-122920	Triticum aestivum	48.80	3.00e-106	377.00
IUUC-Tur-126707	Triticum urartu	41.57	1.00e-80	293.00
IUUC-Vvi-131441	Vitis vinifera	64.35	3.00e-154	537.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence