iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aly-006128

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

GL348717

Gene Name

ARALYDRAFT_907942

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
scaffold_503646.1	scaffold_503646.1	scaffold_503646.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	8.40e-07	30.1	201	259

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf........kdg.plvlpCgHvfhadClqkw.....pglknssskefrCPlCr 46
           C++Cle+         +    l++ C H+f+  C+ +w        +++ s+   CP+Cr
   Q: 201  CCVCLERVlskatpaeR-KfGLLTECDHAFCIACIRNWrssspSTGMDVNSTLRACPICR 259
           9*****99887666642.1345699*************99998888888899999****8 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MSKRILCKFF AHGACLKGEH CEFSHDWKDP TNNICTYYQR GICSYGSRCR YEHVKASRPH 60
PSASSSSPVP LSSPASASNP LARVFLPGVS ERDLSPVPSS CLKPTWNLDS FHQDSLDSLD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GATTCCTTCT CTCGATCGCC GATGTCGAAA AGGTGCGTGC TTTACCCATT TCATTTTGGT 60
TTGTCTTCTC TCTTCTTCAT AGGCTGATGA CTTCTTTGTC TGAAAGCTTG CAACGTTTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR018957--Znf_C3HC4_RING-type
IPR000571--Znf_CCCH
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50103--ZF_C3H1
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00097--zf-C3HC4
PF00642--zf-CCCH

SMART

SM00184--RING
SM00356--ZnF_C3H1

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

aly:ARALYDRAFT_907942

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003024	Amborella trichopoda	62.43	9.00e-126	442.00
IUUC-Bdi-015008	Brachypodium distachyon	51.98	1.00e-90	325.00
IUUC-Bol-015688	Brassica oleracea	73.35	2.00e-121	428.00
IUUC-Bra-017169	Brassica rapa	76.18	2.00e-124	438.00
IUUC-Cel-018642	Caenorhabditis elegans	29.91	3.00e-39	155.00
IUUC-Cin-025619	Ciona intestinalis	38.51	3.00e-59	221.00
IUUC-Ggr-039835	Gaeumannomyces graminis	27.54	2.00e-09	56.60
IUUC-Hvu-047044	Hordeum vulgare	50.00	2.00e-82	298.00
IUUC-Laf-054551	Loxodonta africana	33.24	2.00e-50	192.00
IUUC-Meu-056809	Macropus eugenii	35.47	4.00e-50	191.00
IUUC-Mga-059767	Meleagris gallopavo	34.27	7.00e-49	187.00
IUUC-Mac-064993	Musa acuminata	65.07	2.00e-130	457.00
IUUC-Oan-073517	Ornithorhynchus anatinus	48.08	2.00e-11	62.00
IUUC-Olu-087870	Ostreococcus lucimarinus	47.06	2.00e-38	150.00
IUUC-Pop-099909	Populus trichocarpa	68.60	3.00e-137	480.00
IUUC-Ppe-101248	Prunus persica	75.92	3.00e-88	318.00
IUUC-Sit-110077	Setaria italica	50.00	2.00e-104	371.00
IUUC-Sbi-114884	Sorghum bicolor	50.82	3.00e-104	371.00
IUUC-Tca-121675	Theobroma cacao	68.06	4.00e-121	427.00
IUUC-Tme-127048	Tuber melanosporum	28.84	3.00e-19	88.60

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence