iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121346

Ensembl Protein ID

EOX97205

UniProt Accession

A0A061DX23; A0A061DX23_THECC

Genbank Protein ID

EOX97205.1

Protein Name

Transducin/WD40 repeat-like superfamily protein

Genbank Nucleotide ID

CM001880

Gene Name

TCM_006295

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_006295	EOX97205	EOX97205

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.60e-31	106.5	395	436
UBD/Beta-Prp	4.10e-49	168.3	118	379

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.........sd..tllvsGsdDgtikvWDlr 31
           gHt++v cla           d  +++ sGs D+++kvW+++
   Q: 395  GHTGPVKCLAVeedhqtstkADrkWIVYSGSLDKSVKVWRVS 436
           8***********999887773334669*************86 PP

UBD/Beta-Prp

   S: 16   vkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdls.................................t 83
           ++   +++ll tgs+++ i+vw+  +   ++ ++ +++ v+a+    d   + tg++D+ i+vw++s                                  
   Q: 118  LAA--SRDLLYTGSDSKNIRVWKSLK--EFSGFKAKSGLVKAIIVLGD--RIFTGHQDGKIRVWNVSstnpsvhkrfgslptlkdiikssvkpknyvevrR 212
           444..8899**************999..56899*********999998..7*************99999999*******************9999999755 PP
   S: 84   gkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl......ktgkllrtltgg 178
              v  +k h d v +ls++++   l sGs+d+t++vw l + +cle   + hd+++n+vv  ++++l+++Gs+D+tv++W+        + +l++ l + 
   Q: 213  KRSVLRIK-HFDAVSCLSLNEELGLLYSGSWDKTLKVWLLANSKCLE-SIDAHDDAINSVVA-GFDSLVFTGSADGTVKVWKRelqgqgTQHFLVQLLLK- 309
           55555555.**************************************.77788888888765.568*****************99999777777777788. PP
   S: 179  htdsvyslsfdsngkelvsgsldgtvklwdlq.tgecvrtlnghtdnvksvrfspnderlvsgssDgsiriW 249
           ++++v+ l++++++  l  gs dg v++w+ + + +    l+gh+  v+++++   ++++ sgs+D+si +W
   Q: 310  QENAVTALAVSQESAVLYCGSSDGLVNFWEREkHLSHGGVLRGHKMAVLCLATA--GNLVFSGSADKSICVW 379
           ******************************99644446899*************..**************** PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MRNDGGETMV MERNSLHKRP NLSSLFQQSE PSLFSVKNSV VVEDVFPNSK SSASLASPRN 60
SNCTTTSGEG SPYIMSPWNQ PSPYNKSPWI TPSPLENDFG QNGLIGSIVR EEGHIYSLAA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAGTCTCTGT AATCCTATCA AAAGCAAAGA AATTAGAAGC AAACACTCAA ATTTTTTCTC 60
CTATCCCTTC ATTTTATATC AAATTTCTTG TCCAATTTTC AGTTTATTTC TCATTGTTAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bol-015603	Brassica oleracea	65.36	4.00e-142	496.00
IUUC-Mac-065108	Musa acuminata	51.60	6.00e-104	370.00
IUUC-Pop-099212	Populus trichocarpa	74.88	0.00e+00	650.00
IUUC-Ppe-101355	Prunus persica	70.39	0.00e+00	637.00
IUUC-Sly-111118	Solanum lycopersicum	67.67	1.00e-143	501.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence