iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.3__3262__AT2G16780.1	fgenesh2_kg.3__3262__AT2G16780.1	fgenesh2_kg.3__3262__AT2G16780.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.60e-34	115.7	215	250

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf...sdtllvsGsdDgtikvWDlrtg 33
           gH++s+ ++++   +++l+ s++ Dg + +WD+rt+
   Q: 215  GHESSIADVSWhmkNENLFGSAGEDGRLVIWDTRTN 250
           8************766****************9986 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MADEGKEDTG MDQVEEDFSV WKKNTPFLYD LLISHPLEWP SLTVHWVPST PSPYAADPYF 60
GVHKLILGTH TSGSAQDFLM VADVVTPTPN GEPGLGGPNQ DPIIPKVEIR QKIRVDGEVN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAGAGAGAGA AGTAGATTGA GAGGCGAGAG AGATAATGGC AGATGAAGGT AAGGAGGATA 60
CGGGAATGGA TCAAGTGGAG GAAGATTTCT CAGTGTGGAA GAAGAACACA CCATTTCTCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR022052--Histone-bd_RBBP4_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12265--CAF1C_H4-bd
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005829--C:cytosol
GO:0005634--C:nucleus

KEGG

aly:ARALYDRAFT_480561

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-007342	Arabidopsis thaliana	95.90	0.00e+00	807.00
IUUC-Bol-016584	Brassica oleracea	92.75	0.00e+00	756.00
IUUC-Bra-016771	Brassica rapa	92.73	0.00e+00	784.00
IUUC-Pop-099884	Populus trichocarpa	70.73	2.00e-176	610.00
IUUC-Ppe-101659	Prunus persica	69.95	6.00e-162	562.00
IUUC-Sly-111542	Solanum lycopersicum	71.54	7.00e-163	565.00
IUUC-Stu-112318	Solanum tuberosum	71.09	3.00e-158	550.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence