iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gma-043256

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000845

Gene Name

LOC100791834; GLYMA_12G033100

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA12G03700	GLYMA12G03700.1	GLYMA12G03700.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.90e-29	102.1	295	326
UBD/Beta-Prp	7.30e-41	141.9	139	326

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tllvsGsdDgtikvWDl 30
           Htd+v+ +++  +  t l+s++ D  ++vWDl
   Q: 295  HTDEVFQVEWdpNHeTVLASSGADRRLMVWDL 326
           ***********644799**************7 PP

UBD/Beta-Prp

   S: 78   vwdls.....tgkcvhtlkghedsvlslsfsp.sgdklvsGshdrtirvwdletgqclee.....tlsghdgvvncvvvhpdg.nllvsGslDr 159
           v+d+      ++++   l+gh+++ + ls+sp ++ +l+sGshd  + +wd++  +  +      + +gh+ vv  v+++ ++ n++ s+++D 
   Q: 139  VFDFTkergsACDPDLRLRGHDKEGYGLSWSPfKNGYLLSGSHDHKVCLWDVPGASQEKVldalhIYEGHENVVEDVSWNLKDeNMFGSSGDDC 232
           5544444444666667788999999999999977799999999999999999766555545678899999999999999999999999999999 PP
   S: 160  tvrlWdlktgkllrtltgghtdsvyslsfdsng.kelvsgsldgtvklwdlqtgec.vrtlnghtdnvksvrfs.pnderlvsgssDgsiriWd 250
           ++ +Wdl+t+k  +  +  h++ v+ lsf++     l+++s d++v l+d ++  + +++l  htd v +v+ + ++++ l+s ++D+ + +Wd
   Q: 233  KLIIWDLRTNKAQQSVKP-HEKEVNFLSFNPYNeWILATASSDTDVGLFDTRKLAVpLHILSSHTDEVFQVEWDpNHETVLASSGADRRLMVWD 325
           999999999999999987.999999999987553778899999999999999666559999999999999999955667778888999999999 PP
   S: 251  l 251
           l
   Q: 326  L 326
           7 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MAEEYEEGGE VEEEFSVWKK NTPLLYDFFI SHPLQWPSLT VHWLPSSPQP HSHPSFNLHK 60
LLLATHTSEG ESNFLMLADA SLPVDTSQHI VATDPNNPVL PKVEISQRIS VDGEVNRARC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCGCAAGTGT AATGCTCTGC TCCACTATTA AAACCTGCGT TTCTCTCTGA CAGTGGCATT 60
CGCGCGCGAG GGTTTGAAGT TTTGGCGCTG AAAGAAAAAT GGCGGAAGAG TACGAGGAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR022052--Histone-bd_RBBP4_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12265--CAF1C_H4-bd
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005978	Arabidopsis lyrata	65.37	4.00e-159	554.00
IUUC-Ath-007342	Arabidopsis thaliana	67.98	5.00e-158	550.00
IUUC-Bol-015255	Brassica oleracea	68.65	4.00e-160	557.00
IUUC-Bra-017585	Brassica rapa	69.17	7.00e-162	563.00
IUUC-Mtr-058292	Medicago truncatula	80.88	0.00e+00	627.00
IUUC-Obr-076642	Oryza brachyantha	57.78	2.00e-120	425.00
IUUC-Pop-099884	Populus trichocarpa	70.36	3.00e-163	568.00
IUUC-Ppe-101659	Prunus persica	70.84	9.00e-154	536.00
IUUC-Sit-109983	Setaria italica	55.56	5.00e-116	410.00
IUUC-Sly-111542	Solanum lycopersicum	68.23	4.00e-155	540.00
IUUC-Stu-112318	Solanum tuberosum	68.59	2.00e-154	538.00
IUUC-Tca-121803	Theobroma cacao	71.57	5.00e-170	590.00
IUUC-Tae-125023	Triticum aestivum	56.45	1.00e-116	412.00
IUUC-Vvi-131203	Vitis vinifera	70.08	4.00e-163	567.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence