iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099884

UUCD1 version

UUC-PoT-00711

Ensembl Protein ID

POPTR_0009s13750.3

UniProt Accession

B9HR56; B9HR56_POPTR

Genbank Protein ID

EEE86915.2; ERP57083.1; ERP57084.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000345; CM000345; CM000345

Gene Name

POPTR_0009s13750g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0009s13750	POPTR_0009s13750.3	POPTR_0009s13750.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.10e-31	108.6	177	203

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 7    tclaf...sdtllvsGsdDgtikvWDl 30
           ++l++     ++lvsGs+D+ i +WD+
   Q: 177  YGLSWspfKQGYLVSGSHDNRICLWDV 203
           78999986339***************8 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MAPVEDDQDV GQDQLDEEFS VWKKNTPFLY DFVISHPLEW PSLTVQWVPL ATPLPHSTDP 60
SSFSVHKLVL GTHTSDDFPN YLLIADAVLP TSVAEAKIDA SGSSTNSVIP KVEITQKIRV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACCTTTGAAC TAGCAATGAA TATGATTTAT GAAAAATGAG AAGATGCTGA TTATGTCCCT 60
CACGGGTTCT CGCAAGGTGA AAAAGATCAC CATCATAAAG AAAGGCATTT TGGTATCGTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR022052--Histone-bd_RBBP4_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12265--CAF1C_H4-bd
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus

KEGG

pop:POPTR_0009s13750g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005708	Arabidopsis lyrata	70.73	2.00e-176	610.00
IUUC-Ath-007342	Arabidopsis thaliana	71.50	2.00e-174	604.00
IUUC-Bol-016584	Brassica oleracea	70.79	9.00e-173	598.00
IUUC-Bra-016771	Brassica rapa	72.25	8.00e-177	612.00
IUUC-Gma-043256	Glycine max	69.33	2.00e-152	531.00
IUUC-Mtr-058292	Medicago truncatula	67.78	1.00e-148	518.00
IUUC-Sly-111542	Solanum lycopersicum	71.17	3.00e-166	577.00
IUUC-Stu-112318	Solanum tuberosum	71.50	3.00e-163	566.00
IUUC-Tca-121803	Theobroma cacao	77.00	0.00e+00	644.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence