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Tag Content
iUUCD ID IUUC-Vvi-131074
Ensembl Protein ID VIT_03s0038g00160.t01
UniProt Accession D7U5K6; D7U5K6_VITVI
Genbank Protein ID CBI38025.3
Protein Name Putative uncharacterized protein
Genbank Nucleotide ID FN596508
Gene Name SHL1; VIT_03s0038g00160
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
VIT_03s0038g00160 VIT_03s0038g00160.t01 VIT_03s0038g00160.t01
Status Unreviewed
Classification
Family E-Value Score Start End
E3 activity/RING/PHD 9.50e-09 35.9 140 188
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 activity/RING/PHD

   S: 3    vClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCrs 53
    +C C+ +++ ++ +v+Ce C++wfHpaC ++ ee ++ e+++C++C+s
   Q: 140 YC-KCEMPYNPDDLMVQCEGCTDWFHPACIDMT-PEEAKRLEHFFCQNCSS 188
    78.7*****************************.555555556******87 PP
   

Organism Vitis vinifera
Protein Sequence
(Fasta)
MAKARAPRRT LDSYTIKSIN KTIRAGDCVL MRPSDSSKPS YVAKVEKIES DGRGSVKVHV 60
RWYYRPEESI GGRRQFHGSK EVFLSDHYDV QSADTIEGKC TVHTFKSYTK LDAVGNDDFF 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Vvi-131074|E3,PHD|Vitis vinifera
Please wait for a moment...
Nucleotide Sequence
(Fasta)
CGAGCGTGTG CATGTGTGTT TGTATTGTTC AACAGTTCAT GGCCAAAGCC CGGGCTCCCA 60
GACGAACCCT AGACTCTTAC ACAATCAAAT CTATCAATAA AACAATTCGA GGTGAGCCAA 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Vvi-131074|E3,PHD|Vitis vinifera
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001025--BAH_dom
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51038--BAH
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF01426--BAH
PF00628--PHD

SMART

SM00439--BAH
SM00249--PHD

Gene Ontology

GO:0000785--C:chromatin
GO:0005677--C:chromatin silencing complex
GO:0003682--F:chromatin binding
GO:0000976--F:transcription regulatory region sequence-specific DNA binding
GO:0008270--F:zinc ion binding
GO:0006342--P:chromatin silencing
GO:0031507--P:heterochromatin assembly

Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aly-005443 Arabidopsis lyrata 71.83 6.00e-92 328.00
IUUC-Ago-007912 Ashbya gossypii 47.22 9.00e-03 34.30
IUUC-Ani-009326 Aspergillus nidulans 40.00 5.00e-07 49.30
IUUC-Cre-022934 Chlamydomonas reinhardtii 45.29 1.00e-44 171.00
IUUC-Gma-042998 Glycine max 87.96 7.00e-116 408.00
IUUC-Hvu-047723 Hordeum vulgare 66.51 5.00e-81 292.00
IUUC-Lpe-051138 Leersia perrieri 70.81 7.00e-90 322.00
IUUC-Loc-051927 Lepisosteus oculatus 33.77 6.00e-11 62.40
IUUC-Mtr-058621 Medicago truncatula 81.65 7.00e-108 382.00
IUUC-Oba-075855 Oryza barthii 70.14 4.00e-90 323.00
IUUC-Oin-079179 Oryza indica 70.18 3.00e-92 330.00
IUUC-Ome-081714 Oryza meridionalis 69.95 3.00e-91 326.00
IUUC-Oni-082099 Oryza nivara 69.95 3.00e-91 326.00
IUUC-Osa-085620 Oryza sativa 70.18 3.00e-92 330.00
IUUC-Pma-094621 Petromyzon marinus 39.58 3.00e-09 55.50
IUUC-Pop-098853 Populus trichocarpa 86.11 1.00e-112 397.00
IUUC-Ppe-101818 Prunus persica 87.96 1.00e-114 404.00
IUUC-Sit-110445 Setaria italica 70.64 3.00e-92 330.00
IUUC-Sly-110932 Solanum lycopersicum 87.50 1.00e-115 407.00
IUUC-Stu-112357 Solanum tuberosum 86.11 6.00e-112 395.00
IUUC-Sbi-113989 Sorghum bicolor 72.02 7.00e-94 335.00
IUUC-Tni-119736 Tetraodon nigroviridis 38.00 2.00e-09 57.40
IUUC-Tca-121689 Theobroma cacao 88.04 2.00e-112 397.00
IUUC-Tae-123050 Triticum aestivum 69.27 1.00e-90 325.00
Created Date 25-Jun-2017

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