iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tvi-122342

Ensembl Protein ID

EHK17535

UniProt Accession

G9N737; G9N737_HYPVG

Genbank Protein ID

EHK17535.1

Protein Name

DNA repair protein REV1

Genbank Nucleotide ID

ABDF02000088

Gene Name

TRIVIDRAFT_43150

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TRIVIDRAFT_43150	EHK17535	EHK17535

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBM	1.10e-18	65.5	961	985

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBM

   S: 4    qvDpeVfsqLPeeiQeEvmaelrqq 28
            +Dpe++++LPe++++Ev+a+ r++
   Q: 961  ELDPEFLAELPEDVRKEVIADHRRR 985
           69*******************9986 PP

Organism

Trichoderma virens

Functional Description
(View)

Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template-dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents.

Protein Sequence
(Fasta)

MNSALEKNSS AVRKRIESHV FEDEEGEEYE GSAFNGFGDY FRRKKIKLQN LDAEIRASSD 60
KPPIFKGVVA HVNGYTQPPL QMLHRDIVEH GGGFLQYLDS KTMATHIITA TLPPKKAVEF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAATAGTG CACTGGAAAA GAACTCCTCC GCGGTGAGGA AACGCATTGA GAGCCATGTC 60
TTTGAAGATG AAGAGGGAGA GGAGTATGAA GGCAGTGCAT TCAATGGCTT TGGCGATTAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0227--DNA damage
KW-0234--DNA repair
KW-0237--DNA synthesis
KW-0238--DNA-binding
KW-0548--Nucleotidyltransferase
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR001357--BRCT_dom
IPR017961--DNA_pol_Y-fam_little_finger
IPR025527--DUF4414
IPR012112--REV1
IPR031991--Rev1_C
IPR001126--UmuC

PROSITE

PS50172--BRCT
PS50173--UMUC

Pfam

PF16589--BRCT_2
PF14377--DUF4414
PF00817--IMS
PF11799--IMS_C
PF16727--REV1_C

SMART

SM00292--BRCT

Gene Ontology

GO:0005634--C:nucleus
GO:0003684--F:damaged DNA binding
GO:0016779--F:nucleotidyltransferase activity
GO:0042276--P:error-prone translesion synthesis

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000375	Aegilops tauschii	40.77	6.00e-25	108.00
IUUC-Aml-001185	Ailuropoda melanoleuca	35.98	7.00e-88	317.00
IUUC-Atr-002915	Amborella trichopoda	29.14	9.00e-71	260.00
IUUC-Apl-004054	Anas platyrhynchos	32.22	5.00e-71	261.00
IUUC-Aca-004304	Anolis carolinensis	29.21	4.00e-87	315.00
IUUC-Aly-005696	Arabidopsis lyrata	33.05	2.00e-89	322.00
IUUC-Ath-006893	Arabidopsis thaliana	32.72	2.00e-92	332.00
IUUC-Ago-007722	Ashbya gossypii	33.12	8.00e-62	230.00
IUUC-Acl-008347	Aspergillus clavatus	46.93	0.00e+00	926.00
IUUC-Afl-008444	Aspergillus flavus	54.59	0.00e+00	841.00
IUUC-Afu-008837	Aspergillus fumigatus	47.53	0.00e+00	969.00
IUUC-Ani-009188	Aspergillus nidulans	47.38	0.00e+00	900.00
IUUC-Ang-009866	Aspergillus niger	53.91	0.00e+00	903.00
IUUC-Aor-010107	Aspergillus oryzae	54.59	0.00e+00	842.00
IUUC-Ate-010359	Aspergillus terreus	44.79	0.00e+00	903.00
IUUC-Ame-010664	Astyanax mexicanus	32.73	2.00e-76	280.00
IUUC-Bgr-012244	Blumeria graminis	44.60	5.00e-175	606.00
IUUC-Bta-013405	Bos taurus	29.93	3.00e-79	288.00
IUUC-Bci-013849	Botrytis cinerea	49.28	0.00e+00	765.00
IUUC-Bdi-014066	Brachypodium distachyon	31.00	3.00e-88	318.00
IUUC-Bol-015544	Brassica oleracea	33.09	2.00e-95	342.00
IUUC-Bra-017792	Brassica rapa	31.79	1.00e-90	326.00
IUUC-Cel-018148	Caenorhabditis elegans	32.74	8.00e-68	250.00
IUUC-Cja-019742	Callithrix jacchus	31.81	2.00e-52	199.00
IUUC-Cfa-020112	Canis familiaris	30.75	2.00e-89	322.00
IUUC-Cpo-022152	Cavia porcellus	31.47	2.00e-87	316.00
IUUC-Cre-022951	Chlamydomonas reinhardtii	29.67	1.00e-34	139.00
IUUC-Csa-023504	Chlorocebus sabaeus	35.57	2.00e-82	299.00
IUUC-Cho-024780	Choloepus hoffmanni	31.43	3.00e-24	105.00
IUUC-Cin-025276	Ciona intestinalis	39.20	6.00e-84	303.00
IUUC-Csv-026283	Ciona savignyi	33.54	5.00e-73	267.00
IUUC-Cgl-026726	Colletotrichum gloeosporioides	58.26	0.00e+00	1256.00
IUUC-Cne-027079	Cryptococcus neoformans	39.29	1.00e-84	306.00
IUUC-Cme-027346	Cyanidioschyzon merolae	25.71	4.00e-53	201.00
IUUC-Dre-028073	Danio rerio	29.97	1.00e-78	286.00
IUUC-Dno-030038	Dasypus novemcinctus	36.51	3.00e-86	312.00
IUUC-Dor-031100	Dipodomys ordii	28.76	7.00e-74	271.00
IUUC-Dse-031310	Dothistroma septosporum	46.95	0.00e+00	907.00
IUUC-Dme-031991	Drosophila melanogaster	26.74	3.00e-76	278.00
IUUC-Ete-033082	Echinops telfairi	40.49	4.00e-41	162.00
IUUC-Eca-033471	Equus caballus	31.85	4.00e-88	318.00
IUUC-Eeu-034993	Erinaceus europaeus	41.49	3.00e-69	255.00
IUUC-Fca-035367	Felis catus	30.76	1.00e-86	313.00
IUUC-Fal-036973	Ficedula albicollis	41.72	5.00e-71	261.00
IUUC-Fox-037677	Fusarium oxysporum	61.08	0.00e+00	1181.00
IUUC-Fso-038252	Fusarium solani	62.94	0.00e+00	1385.00
IUUC-Gmo-039669	Gadus morhua	31.25	1.00e-80	293.00
IUUC-Ggr-039988	Gaeumannomyces graminis	50.24	0.00e+00	1073.00
IUUC-Gga-040423	Gallus gallus	30.58	1.00e-78	287.00
IUUC-Gac-042134	Gasterosteus aculeatus	32.22	7.00e-76	277.00
IUUC-Gma-042929	Glycine max	31.69	1.00e-93	336.00
IUUC-Ggo-044528	Gorilla gorilla	30.91	2.00e-82	299.00
IUUC-Hsa-046259	Homo sapiens	30.91	5.00e-82	298.00
IUUC-Hvu-047139	Hordeum vulgare	36.60	4.00e-54	203.00
IUUC-Itr-048621	Ictidomys tridecemlineatus	30.14	2.00e-88	318.00
IUUC-Kpa-049169	Komagataella pastoris	39.01	2.00e-84	305.00
IUUC-Lch-050471	Latimeria chalumnae	35.31	5.00e-82	298.00
IUUC-Lpe-050800	Leersia perrieri	30.43	1.00e-85	309.00
IUUC-Loc-052320	Lepisosteus oculatus	26.40	5.00e-57	214.00
IUUC-Lma-053149	Leptosphaeria maculans	43.79	0.00e+00	807.00
IUUC-Laf-053810	Loxodonta africana	31.02	3.00e-83	302.00
IUUC-Mcc-055574	Macaca mulatta	35.73	4.00e-82	298.00
IUUC-Meu-055945	Macropus eugenii	40.37	2.00e-29	123.00
IUUC-Mor-057195	Magnaporthe oryzae	52.20	0.00e+00	1102.00
IUUC-Mpo-057488	Magnaporthe poae	49.76	0.00e+00	1077.00
IUUC-Mtr-057955	Medicago truncatula	33.15	1.00e-98	353.00
IUUC-Mla-059027	Melampsora laricipopulina	34.39	3.00e-82	298.00
IUUC-Mga-060156	Meleagris gallopavo	35.33	2.00e-79	289.00
IUUC-Mvi-060398	Microbotryum violaceum	36.33	3.00e-81	295.00
IUUC-Mmr-061113	Microcebus murinus	30.73	8.00e-81	294.00
IUUC-Mdo-063001	Monodelphis domestica	29.33	1.00e-79	290.00
IUUC-Mmu-063180	Mus musculus	30.83	3.00e-80	292.00
IUUC-Mac-065551	Musa acuminata	36.30	6.00e-40	157.00
IUUC-Mpu-066525	Mustela putorius furo	31.33	2.00e-88	319.00
IUUC-Mlu-067877	Myotis lucifugus	36.51	1.00e-81	296.00
IUUC-Nfi-068418	Neosartorya fischeri	48.03	0.00e+00	978.00
IUUC-Ncr-068648	Neurospora crassa	57.14	0.00e+00	952.00
IUUC-Nle-069959	Nomascus leucogenys	35.53	4.00e-82	298.00
IUUC-Opr-070522	Ochotona princeps	45.00	2.00e-48	186.00
IUUC-Ont-072293	Oreochromis niloticus	30.09	5.00e-64	238.00
IUUC-Oan-073519	Ornithorhynchus anatinus	42.60	2.00e-76	279.00
IUUC-Ocu-074492	Oryctolagus cuniculus	31.42	3.00e-83	301.00
IUUC-Oba-075567	Oryza barthii	31.11	1.00e-90	326.00
IUUC-Obr-076332	Oryza brachyantha	30.79	1.00e-86	313.00
IUUC-Ogl-077348	Oryza glaberrima	31.02	2.00e-91	328.00
IUUC-Ogu-078779	Oryza glumaepatula	31.11	6.00e-91	327.00
IUUC-Oin-079738	Oryza indica	28.75	1.00e-80	293.00
IUUC-Olo-080701	Oryza longistaminata	28.62	4.00e-80	291.00
IUUC-Ome-081708	Oryza meridionalis	34.95	1.00e-72	267.00
IUUC-Oni-082251	Oryza nivara	30.98	4.00e-88	318.00
IUUC-Opu-083528	Oryza punctata	30.72	1.00e-83	303.00
IUUC-Oru-084293	Oryza rufipogon	30.73	2.00e-86	312.00
IUUC-Osa-085549	Oryza sativa	31.02	3.00e-91	328.00
IUUC-Ola-086793	Oryzias latipes	40.77	6.00e-72	264.00
IUUC-Olu-087786	Ostreococcus lucimarinus	34.26	1.00e-68	252.00
IUUC-Oga-089006	Otolemur garnettii	34.17	9.00e-74	270.00
IUUC-Oar-089597	Ovis aries	31.20	4.00e-88	318.00
IUUC-Ptr-091520	Pan troglodytes	35.53	7.00e-82	297.00
IUUC-Pan-092333	Papio anubis	35.53	9.00e-82	297.00
IUUC-Psi-094004	Pelodiscus sinensis	34.33	3.00e-74	272.00
IUUC-Pma-094128	Petromyzon marinus	33.44	2.00e-45	175.00
IUUC-Pno-094849	Phaeosphaeria nodorum	46.04	0.00e+00	717.00
IUUC-Ppa-095714	Physcomitrella patens	29.99	2.00e-95	342.00
IUUC-Pfo-096569	Poecilia formosa	40.18	5.00e-69	254.00
IUUC-Pab-097960	Pongo abelii	35.13	3.00e-81	295.00
IUUC-Pop-098921	Populus trichocarpa	35.80	3.00e-73	268.00
IUUC-Pca-100509	Procavia capensis	45.56	7.00e-33	134.00
IUUC-Ppe-101730	Prunus persica	33.33	4.00e-98	351.00
IUUC-Pva-102142	Pteropus vampyrus	35.37	9.00e-82	297.00
IUUC-Pgr-103446	Puccinia graminis	37.06	3.00e-62	232.00
IUUC-Ptt-103849	Puccinia triticina	34.39	2.00e-100	360.00
IUUC-Pte-104128	Pyrenophora teres	47.80	0.00e+00	962.00
IUUC-Pyt-104754	Pyrenophora triticirepentis	54.27	0.00e+00	868.00
IUUC-Rno-104871	Rattus norvegicus	31.68	6.00e-87	314.00
IUUC-Sce-106236	Saccharomyces cerevisiae	30.73	3.00e-63	235.00
IUUC-Sha-106962	Sarcophilus harrisii	33.99	2.00e-75	276.00
IUUC-Sja-107691	Schizosaccharomyces japonicus	31.86	3.00e-86	311.00
IUUC-Spo-108170	Schizosaccharomyces pombe	40.68	9.00e-84	303.00
IUUC-Ssl-108668	Sclerotinia sclerotiorum	49.21	0.00e+00	970.00
IUUC-Smo-109554	Selaginella moellendorffii	30.75	6.00e-89	321.00
IUUC-Sit-110479	Setaria italica	29.00	4.00e-56	211.00
IUUC-Sly-111752	Solanum lycopersicum	32.57	4.00e-91	328.00
IUUC-Stu-112284	Solanum tuberosum	23.77	2.00e-18	85.90
IUUC-Sar-113304	Sorex araneus	36.13	1.00e-86	313.00
IUUC-Sbi-114196	Sorghum bicolor	26.43	1.00e-61	230.00
IUUC-Sre-115151	Sporisorium reilianum	33.02	6.00e-85	308.00
IUUC-Ssc-116104	Sus scrofa	41.57	6.00e-71	261.00
IUUC-Tgu-117438	Taeniopygia guttata	29.30	2.00e-96	345.00
IUUC-Tru-118553	Takifugu rubripes	38.18	8.00e-67	247.00
IUUC-Tsy-119056	Tarsius syrichta	33.05	3.00e-89	322.00
IUUC-Tni-119933	Tetraodon nigroviridis	30.47	1.00e-75	276.00
IUUC-Tca-121376	Theobroma cacao	31.96	4.00e-95	341.00
IUUC-Tre-121972	Trichoderma reesei	77.88	0.00e+00	1675.00
IUUC-Tae-123898	Triticum aestivum	29.85	1.00e-85	309.00
IUUC-Tur-126735	Triticum urartu	25.26	2.00e-30	126.00
IUUC-Tme-126999	Tuber melanosporum	46.38	4.00e-116	411.00
IUUC-Tbe-127280	Tupaia belangeri	45.95	2.00e-31	129.00
IUUC-Ttr-129104	Tursiops truncatus	35.19	3.00e-81	295.00
IUUC-Uma-129562	Ustilago maydis	31.79	1.00e-83	303.00
IUUC-Vda-129862	Verticillium dahliae	54.68	0.00e+00	1160.00
IUUC-Vpa-130819	Vicugna pacos	28.82	4.00e-62	231.00
IUUC-Vvi-131111	Vitis vinifera	31.39	1.00e-90	326.00
IUUC-Xtr-132629	Xenopus tropicalis	30.70	6.00e-82	297.00
IUUC-Xma-134065	Xiphophorus maculatus	33.33	4.00e-73	268.00
IUUC-Yli-134633	Yarrowia lipolytica	39.35	6.00e-80	291.00
IUUC-Zma-135176	Zea mays	33.06	3.00e-78	285.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence