iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Dre-028159

UUCD1 version

UUC-DaR-01316

Ensembl Protein ID

ENSDARP00000015105.6

UniProt Accession

Q7ZWF0; Q6P037; RAE1L_DANRE

Genbank Protein ID

AAH49445.1; AAH65853.1

Protein Name

mRNA export factor; Rae1 protein homolog; mRNA-associated protein mrnp 41

Genbank Nucleotide ID

BC049445; BC065853

Gene Name

rae1; mrnp41

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSDARG00000007196.8	ENSDART00000020333.7	ENSDARP00000015105.6

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.70e-21	75.7	125	163

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf...sd.tllvsGsdDgtikvWDlrtgvl 35
           +H+++++ +++   ++   + +Gs+D+t+k WD+r+ ++
   Q: 125  QHEGPIRTIHWikaPNySCIMTGSWDKTLKFWDTRSPNP 163
           5*************87788**************998776 PP

Organism

Danio rerio

Functional Description
(View)

Binds mRNA. May function in nucleocytoplasmic transport and in directly or indirectly attaching cytoplasmic mRNPs to the cytoskeleton (By similarity).

Protein Sequence
(Fasta)

MSLFGTNTGF GSGGTGVFGS TTTDSHNPMK DVEVTSPPDD SISCLAFSPP TMPGNFLIGG 60
SWANDVRCWE VQDNGQTVPK AQQMHTGPVL DVCWSDDGSK VFTASCDKTA KMWDLNSNQA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGTGTCGTTT CCTGAAGCGG GAACCTGTTA TATGGGAATA ATCAAATATT TGCACGGCTG 60
TTACCTGAGT AAGTTTAGCT GAATAAGATG TTTTAACTGA CCATTACCAT TAATGGATAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus

KEGG

dre:393973

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000293	Aegilops tauschii	46.11	4.00e-81	295.00
IUUC-Aml-002179	Ailuropoda melanoleuca	92.46	0.00e+00	696.00
IUUC-Atr-002609	Amborella trichopoda	50.74	1.00e-94	340.00
IUUC-Apl-003637	Anas platyrhynchos	92.75	0.00e+00	696.00
IUUC-Aca-005042	Anolis carolinensis	92.46	0.00e+00	693.00
IUUC-Aly-006015	Arabidopsis lyrata	49.44	2.00e-96	345.00
IUUC-Ath-007659	Arabidopsis thaliana	50.00	7.00e-97	347.00
IUUC-Ago-008004	Ashbya gossypii	42.32	6.00e-76	277.00
IUUC-Acl-008030	Aspergillus clavatus	46.92	6.00e-82	297.00
IUUC-Afl-008636	Aspergillus flavus	46.33	6.00e-81	294.00
IUUC-Afu-009121	Aspergillus fumigatus	47.51	4.00e-83	301.00
IUUC-Ani-009238	Aspergillus nidulans	46.92	1.00e-81	296.00
IUUC-Ang-009801	Aspergillus niger	46.38	6.00e-83	300.00
IUUC-Aor-009974	Aspergillus oryzae	46.33	6.00e-81	294.00
IUUC-Ate-010406	Aspergillus terreus	45.41	4.00e-83	301.00
IUUC-Ame-011368	Astyanax mexicanus	97.97	0.00e+00	723.00
IUUC-Bgr-012233	Blumeria graminis	43.72	9.00e-73	267.00
IUUC-Bta-012856	Bos taurus	92.46	0.00e+00	696.00
IUUC-Bci-013964	Botrytis cinerea	46.63	7.00e-79	287.00
IUUC-Bdi-014049	Brachypodium distachyon	48.84	1.00e-91	329.00
IUUC-Bol-015367	Brassica oleracea	48.88	3.00e-92	332.00
IUUC-Bra-016903	Brassica rapa	48.88	3.00e-92	332.00
IUUC-Cel-018563	Caenorhabditis elegans	49.87	7.00e-99	353.00
IUUC-Cja-019700	Callithrix jacchus	92.46	0.00e+00	695.00
IUUC-Cfa-020337	Canis familiaris	92.75	0.00e+00	697.00
IUUC-Cpo-021858	Cavia porcellus	93.33	0.00e+00	700.00
IUUC-Cre-022748	Chlamydomonas reinhardtii	45.04	2.00e-83	302.00
IUUC-Csa-023322	Chlorocebus sabaeus	92.17	0.00e+00	693.00
IUUC-Cho-024533	Choloepus hoffmanni	66.09	3.00e-128	451.00
IUUC-Cin-025393	Ciona intestinalis	70.81	4.00e-162	563.00
IUUC-Csv-026093	Ciona savignyi	71.08	4.00e-162	563.00
IUUC-Cgl-026503	Colletotrichum gloeosporioides	38.27	1.00e-57	216.00
IUUC-Cne-026774	Cryptococcus neoformans	42.24	4.00e-69	254.00
IUUC-Cme-027243	Cyanidioschyzon merolae	36.88	1.00e-67	250.00
IUUC-Dno-028852	Dasypus novemcinctus	92.75	0.00e+00	697.00
IUUC-Dor-030445	Dipodomys ordii	78.26	5.00e-160	556.00
IUUC-Dse-031161	Dothistroma septosporum	44.15	3.00e-69	255.00
IUUC-Dme-032009	Drosophila melanogaster	69.05	5.00e-149	520.00
IUUC-Eca-033306	Equus caballus	92.46	0.00e+00	694.00
IUUC-Fca-035579	Felis catus	92.75	0.00e+00	697.00
IUUC-Fal-037582	Ficedula albicollis	93.04	0.00e+00	699.00
IUUC-Fox-037772	Fusarium oxysporum	43.62	5.00e-75	274.00
IUUC-Fso-038368	Fusarium solani	43.75	4.00e-76	278.00
IUUC-Gmo-038500	Gadus morhua	95.65	0.00e+00	707.00
IUUC-Ggr-040019	Gaeumannomyces graminis	42.78	1.00e-75	276.00
IUUC-Gga-040684	Gallus gallus	93.04	0.00e+00	696.00
IUUC-Gac-042592	Gasterosteus aculeatus	96.52	0.00e+00	711.00
IUUC-Gma-043208	Glycine max	51.30	3.00e-94	338.00
IUUC-Ggo-044965	Gorilla gorilla	92.46	0.00e+00	694.00
IUUC-Hsa-046779	Homo sapiens	92.11	0.00e+00	636.00
IUUC-Hvu-047380	Hordeum vulgare	47.29	8.00e-84	303.00
IUUC-Itr-048819	Ictidomys tridecemlineatus	92.46	0.00e+00	695.00
IUUC-Kpa-049284	Komagataella pastoris	42.74	5.00e-74	271.00
IUUC-Lch-050559	Latimeria chalumnae	78.71	4.00e-176	610.00
IUUC-Lpe-051050	Leersia perrieri	48.84	2.00e-90	325.00
IUUC-Loc-052874	Lepisosteus oculatus	95.07	0.00e+00	705.00
IUUC-Lma-053085	Leptosphaeria maculans	40.29	1.00e-64	240.00
IUUC-Laf-053980	Loxodonta africana	92.46	0.00e+00	696.00
IUUC-Mcc-055408	Macaca mulatta	92.46	0.00e+00	695.00
IUUC-Meu-056551	Macropus eugenii	84.32	5.00e-178	616.00
IUUC-Mor-057248	Magnaporthe oryzae	44.85	3.00e-80	291.00
IUUC-Mpo-057390	Magnaporthe poae	42.58	2.00e-75	275.00
IUUC-Mtr-057675	Medicago truncatula	50.28	7.00e-96	343.00
IUUC-Mla-059155	Melampsora laricipopulina	45.74	2.00e-88	319.00
IUUC-Mga-060140	Meleagris gallopavo	93.73	6.00e-178	616.00
IUUC-Mvi-060311	Microbotryum violaceum	46.22	1.00e-83	303.00
IUUC-Mmr-061533	Microcebus murinus	93.04	0.00e+00	699.00
IUUC-Mdo-062593	Monodelphis domestica	92.75	0.00e+00	699.00
IUUC-Mmu-063362	Mus musculus	92.75	0.00e+00	697.00
IUUC-Mac-064968	Musa acuminata	46.31	4.00e-82	298.00
IUUC-Mpu-065722	Mustela putorius furo	92.46	0.00e+00	697.00
IUUC-Mlu-068124	Myotis lucifugus	92.46	0.00e+00	696.00
IUUC-Nfi-068595	Neosartorya fischeri	47.51	2.00e-83	302.00
IUUC-Ncr-068790	Neurospora crassa	43.58	1.00e-76	280.00
IUUC-Nle-069395	Nomascus leucogenys	77.97	9.00e-161	559.00
IUUC-Opr-070320	Ochotona princeps	84.35	1.00e-178	619.00
IUUC-Ont-071303	Oreochromis niloticus	97.39	0.00e+00	717.00
IUUC-Oan-073724	Ornithorhynchus anatinus	92.75	0.00e+00	699.00
IUUC-Ocu-074961	Oryctolagus cuniculus	91.25	0.00e+00	635.00
IUUC-Oba-075250	Oryza barthii	49.57	3.00e-90	325.00
IUUC-Obr-076805	Oryza brachyantha	49.43	1.00e-91	329.00
IUUC-Ogl-077767	Oryza glaberrima	48.84	2.00e-90	325.00
IUUC-Ogu-078760	Oryza glumaepatula	49.57	3.00e-90	325.00
IUUC-Oin-080219	Oryza indica	48.84	2.00e-90	325.00
IUUC-Olo-081007	Oryza longistaminata	48.84	2.00e-90	325.00
IUUC-Ome-081848	Oryza meridionalis	47.01	7.00e-88	317.00
IUUC-Oni-082576	Oryza nivara	49.57	2.00e-90	326.00
IUUC-Opu-083511	Oryza punctata	45.60	6.00e-86	311.00
IUUC-Oru-084270	Oryza rufipogon	49.57	4.00e-91	328.00
IUUC-Osa-085707	Oryza sativa	49.57	2.00e-90	326.00
IUUC-Ola-087292	Oryzias latipes	96.23	0.00e+00	710.00
IUUC-Olu-087689	Ostreococcus lucimarinus	50.15	4.00e-94	338.00
IUUC-Oga-088821	Otolemur garnettii	92.75	0.00e+00	697.00
IUUC-Oar-090253	Ovis aries	92.75	0.00e+00	697.00
IUUC-Ptr-091097	Pan troglodytes	91.30	0.00e+00	688.00
IUUC-Pan-091835	Papio anubis	92.46	0.00e+00	695.00
IUUC-Psi-093000	Pelodiscus sinensis	92.77	0.00e+00	698.00
IUUC-Pma-094273	Petromyzon marinus	84.51	0.00e+00	676.00
IUUC-Pno-094920	Phaeosphaeria nodorum	40.29	5.00e-59	221.00
IUUC-Ppa-095202	Physcomitrella patens	52.04	9.00e-76	276.00
IUUC-Pfo-096388	Poecilia formosa	96.20	0.00e+00	722.00
IUUC-Pab-097533	Pongo abelii	92.46	0.00e+00	695.00
IUUC-Pop-099348	Populus trichocarpa	47.19	3.00e-88	318.00
IUUC-Pca-100638	Procavia capensis	68.92	3.00e-60	225.00
IUUC-Ppe-101817	Prunus persica	51.31	9.00e-96	343.00
IUUC-Pva-102233	Pteropus vampyrus	91.88	0.00e+00	691.00
IUUC-Pgr-103342	Puccinia graminis	47.65	3.00e-89	322.00
IUUC-Ptt-103836	Puccinia triticina	46.74	3.00e-91	328.00
IUUC-Pte-104387	Pyrenophora teres	42.32	6.00e-67	248.00
IUUC-Pyt-104737	Pyrenophora triticirepentis	41.69	2.00e-68	252.00
IUUC-Rno-105548	Rattus norvegicus	92.17	0.00e+00	692.00
IUUC-Sce-106379	Saccharomyces cerevisiae	41.49	5.00e-78	284.00
IUUC-Sha-107617	Sarcophilus harrisii	92.62	3.00e-142	497.00
IUUC-Sja-107668	Schizosaccharomyces japonicus	46.11	5.00e-80	291.00
IUUC-Spo-108293	Schizosaccharomyces pombe	46.49	4.00e-87	314.00
IUUC-Smo-109611	Selaginella moellendorffii	49.58	9.00e-95	340.00
IUUC-Sit-110436	Setaria italica	48.42	4.00e-91	327.00
IUUC-Sly-111037	Solanum lycopersicum	47.85	9.00e-97	346.00
IUUC-Sbi-114361	Sorghum bicolor	47.80	3.00e-92	332.00
IUUC-Sre-114922	Sporisorium reilianum	41.86	9.00e-68	250.00
IUUC-Ssc-116305	Sus scrofa	92.75	0.00e+00	697.00
IUUC-Tgu-116751	Taeniopygia guttata	93.04	0.00e+00	698.00
IUUC-Tru-117798	Takifugu rubripes	95.94	0.00e+00	707.00
IUUC-Tsy-119523	Tarsius syrichta	93.82	8.00e-162	562.00
IUUC-Tni-120477	Tetraodon nigroviridis	95.39	0.00e+00	705.00
IUUC-Tca-121802	Theobroma cacao	50.56	5.00e-95	340.00
IUUC-Tre-121994	Trichoderma reesei	44.81	4.00e-73	268.00
IUUC-Tvi-122631	Trichoderma virens	43.62	3.00e-71	262.00
IUUC-Tae-124482	Triticum aestivum	49.42	3.00e-92	332.00
IUUC-Tur-126390	Triticum urartu	49.42	2.00e-92	332.00
IUUC-Tme-127152	Tuber melanosporum	47.63	1.00e-79	290.00
IUUC-Tbe-127319	Tupaia belangeri	77.38	3.00e-117	414.00
IUUC-Ttr-129207	Tursiops truncatus	91.57	0.00e+00	683.00
IUUC-Uma-129342	Ustilago maydis	41.40	8.00e-62	231.00
IUUC-Vda-129865	Verticillium dahliae	43.32	1.00e-77	283.00
IUUC-Vpa-130076	Vicugna pacos	81.52	2.00e-153	535.00
IUUC-Vvi-131104	Vitis vinifera	49.86	2.00e-94	339.00
IUUC-Xtr-132917	Xenopus tropicalis	70.98	7.00e-145	506.00
IUUC-Xma-133615	Xiphophorus maculatus	96.81	0.00e+00	716.00
IUUC-Yli-134431	Yarrowia lipolytica	41.64	5.00e-77	281.00
IUUC-Zma-135142	Zea mays	49.28	5.00e-93	334.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence