iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aly-006032

UUCD1 version

UUC-ArL-00726

Ensembl Protein ID

fgenesh1_pm.C_scaffold_7000003

UniProt Accession

D7MEW3; D7MEW3_ARALL

Genbank Protein ID

EFH45093.1

Protein Name

Zinc finger family protein

Genbank Nucleotide ID

GL348719

Gene Name

ARALYDRAFT_327776

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh1_pm.C_scaffold_7000003	fgenesh1_pm.C_scaffold_7000003	fgenesh1_pm.C_scaffold_7000003

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.40e-09	39.0	62	105

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg...plvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl +f+ +   +++ +C H+fh +C++ w     + +++ +CPlCr
   Q: 62   CPICLAEFEAEdavTRLPRCAHLFHINCIEPW-----LLRGHLTCPLCR 105
           ********44433366555*************.....89*********8 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MISMLFPRSP LCTAAIVFYT CVCIPLGRLK KNGGDAEAHD DDGYHLVGVM FGDKEKEEEI 60
CCPICLAEFE AEDAVTRLPR CAHLFHINCI EPWLLRGHLT CPLCRSFVLA PTPYTRNVNN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGATTTCAA TGTTGTTTCC GCGGTCGCCT TTGTGCACAG CAGCCATAGT ATTCTACACA 60
TGTGTGTGCA TTCCCTTAGG GAGGTTGAAG AAGAATGGTG GAGATGCAGA AGCGCATGAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

aly:ARALYDRAFT_327776

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-006708	Arabidopsis thaliana	94.44	7.00e-56	208.00
IUUC-Bol-016104	Brassica oleracea	75.65	2.00e-49	189.00
IUUC-Bra-017196	Brassica rapa	67.44	3.00e-44	172.00
IUUC-Gma-043261	Glycine max	44.17	5.00e-21	92.40
IUUC-Mvi-060247	Microbotryum violaceum	55.10	2.00e-10	60.50
IUUC-Pop-099029	Populus trichocarpa	36.89	1.00e-19	88.20
IUUC-Ppe-101276	Prunus persica	34.21	4.00e-18	83.20
IUUC-Pgr-103545	Puccinia graminis	51.02	4.00e-11	60.80
IUUC-Sly-111434	Solanum lycopersicum	53.45	9.00e-14	68.60
IUUC-Stu-112159	Solanum tuberosum	36.17	4.00e-17	79.70

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence