iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017196

Ensembl Protein ID

Bra012814.1-P

UniProt Accession

M4D8K4; M4D8K4_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra012814	Bra012814.1	Bra012814.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	6.30e-08	34.0	67	110

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg...plvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl d++ +   +++ +C+H+fh +C++ w     + s++ +CPlCr
   Q: 67   CSICLVDYEAEdavTHLPRCNHLFHINCIEPW-----LLSGHLTCPLCR 110
           ********44444477777*************.....8**********8 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MFSLLFSRSP LCTVAIVFYT FVCIPLERLK KQCGVAEPQH DDGYHLPGFM FGDKAKKKEE 60
EEEKLCCSIC LVDYEAEDAV THLPRCNHLF HINCIEPWLL SGHLTCPLCR SFVFSSPSSP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTTCTCTT TGTTGTTTTC GCGGTCACCT TTGTGCACAG TAGCCATAGT ATTCTACACT 60
TTTGTGTGCA TTCCCTTAGA GAGGTTGAAG AAGCAGTGTG GAGTTGCTGA ACCACAACAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR020103--PsdUridine_synth_cat_dom
IPR006224--PsdUridine_synth_RluC/D_CS
IPR006145--PsdUridine_synth_RsuA/RluD
IPR002942--S4_RNA-bd
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS01129--PSI_RLU
PS50089--ZF_RING_2

Pfam

PF00849--PseudoU_synth_2
PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0009982--F:pseudouridine synthase activity
GO:0003723--F:RNA binding
GO:0008270--F:zinc ion binding
GO:0001522--P:pseudouridine synthesis

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006032	Arabidopsis lyrata	72.73	3.00e-42	163.00
IUUC-Ath-006708	Arabidopsis thaliana	72.73	2.00e-37	147.00
IUUC-Bol-016104	Brassica oleracea	92.28	0.00e+00	866.00
IUUC-Gma-043261	Glycine max	44.09	3.00e-20	90.50
IUUC-Pop-099029	Populus trichocarpa	34.88	6.00e-17	79.00
IUUC-Ppe-101276	Prunus persica	36.43	9.00e-18	82.40
IUUC-Stu-112159	Solanum tuberosum	37.50	2.00e-16	77.40
IUUC-Tca-121235	Theobroma cacao	39.69	7.00e-17	79.30

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence