iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ogu-078428

Ensembl Protein ID

OGLUM04G29620.1

UniProt Accession

A0A0D9ZSH1; A0A0D9ZSH1_9ORYZ

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OGLUM04G29620	OGLUM04G29620.1	OGLUM04G29620.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.60e-22	79.8	37	75

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           gHt +v++++f +d + +vsG+ D+++k+WDl+ g+ll+
   Q: 37   GHTRGVNAIRFtPDgRWVVSGGEDNVVKLWDLTAGKLLH 75
           8***********99999******************9986 PP

Organism

Oryza glumaepatula

Protein Sequence
(Fasta)

MSVDFHPFGE FFASGSLDTN LKIWDIRRKG CIHTYKGHTR GVNAIRFTPD GRWVVSGGED 60
NVVKLWDLTA GKLLHDFKCH EGQIQCIDFH PHEFLLATGS SDKTVKFWDL ETFELIGSTG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAGGAGGGCT GCGTCTTCCT CCTCCACCTC CACCACCCGG CCCCAACCAG ACAGCTCCAT 60
TCCCCCTTCC GCCTCCGCCT CCACCACCAC ATCGCCCGCG CGCACCAAAC CCCAAATCGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR020472--G-protein_beta_WD-40_rep
IPR028021--Katanin_C-terminal
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF13925--Katanin_con80
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000954	Aegilops tauschii	54.79	0.00e+00	830.00
IUUC-Aly-006226	Arabidopsis lyrata	45.72	4.00e-158	551.00
IUUC-Ath-007323	Arabidopsis thaliana	45.21	2.00e-163	568.00
IUUC-Bdi-014652	Brachypodium distachyon	65.78	0.00e+00	1026.00
IUUC-Gma-044134	Glycine max	48.96	0.00e+00	663.00
IUUC-Hvu-047649	Hordeum vulgare	65.74	0.00e+00	1031.00
IUUC-Lpe-051554	Leersia perrieri	69.00	0.00e+00	1121.00
IUUC-Mtr-058053	Medicago truncatula	47.62	5.00e-176	610.00
IUUC-Oba-075448	Oryza barthii	99.48	0.00e+00	1488.00
IUUC-Obr-076385	Oryza brachyantha	70.07	0.00e+00	1122.00
IUUC-Ogl-077427	Oryza glaberrima	74.02	0.00e+00	1189.00
IUUC-Oin-079811	Oryza indica	73.90	0.00e+00	1189.00
IUUC-Olo-080245	Oryza longistaminata	69.16	0.00e+00	1078.00
IUUC-Ome-081239	Oryza meridionalis	94.97	0.00e+00	1446.00
IUUC-Oni-082640	Oryza nivara	99.48	0.00e+00	1488.00
IUUC-Opu-083748	Oryza punctata	95.75	0.00e+00	1477.00
IUUC-Oru-084609	Oryza rufipogon	99.48	0.00e+00	1488.00
IUUC-Osa-085988	Oryza sativa	91.22	0.00e+00	1353.00
IUUC-Pop-099149	Populus trichocarpa	49.43	0.00e+00	677.00
IUUC-Sit-110360	Setaria italica	67.15	0.00e+00	1021.00
IUUC-Sly-111307	Solanum lycopersicum	48.19	0.00e+00	653.00
IUUC-Ssc-115949	Sus scrofa	48.77	1.00e-49	190.00
IUUC-Tca-121185	Theobroma cacao	49.81	0.00e+00	695.00
IUUC-Tae-125307	Triticum aestivum	66.47	0.00e+00	1041.00
IUUC-Tur-126411	Triticum urartu	56.14	0.00e+00	803.00
IUUC-Vvi-131489	Vitis vinifera	50.83	0.00e+00	679.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence