iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114226

UUCD1 version

UUC-SoB-00694

Ensembl Protein ID

Sb04g002540.1

UniProt Accession

A0A194YMF5; A0A194YMF5_SORBI

Genbank Protein ID

KXG29381.1; KXG29382.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000763; CM000763

Gene Name

SORBI_004G028800

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb04g002540	Sb04g002540.1	Sb04g002540.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	39.30	9.00e-42	167.00	IUUC-Ath-007198

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MEDPNQSQNQ NQSQFLFSAK AAPLQLFGSA AVPTVGPAGY CNYSGNAHLP VMNQARTSNI 60
DTGTEKLLKL QMSLNDYHQQ NADRLARVGN PSAVSTGLRL SYEDDEHNSS ITSGSASMTS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGGATC CGAATCAGAG CCAGAACCAG AACCAGAGCC AGTTCCTGTT CAGCGCCAAG 60
GCCGCGCCGT TGCAGCTCTT CGGAAGCGCC GCGGGTAACA TGGATAACCT ACCTGCTTAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001370--BIR_rpt
IPR017066--E3ligase_BOI
IPR001841--Znf_RING

PROSITE

PS50089--ZF_RING_2

Gene Ontology

GO:0005634--C:nucleus
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0031347--P:regulation of defense response

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000151	Aegilops tauschii	62.05	2.00e-93	335.00
IUUC-Atr-002499	Amborella trichopoda	44.01	3.00e-66	244.00
IUUC-Aly-006460	Arabidopsis lyrata	39.52	9.00e-55	206.00
IUUC-Ath-007198	Arabidopsis thaliana	39.30	5.00e-52	197.00
IUUC-Bol-016408	Brassica oleracea	37.20	7.00e-53	200.00
IUUC-Bra-017185	Brassica rapa	36.55	5.00e-54	203.00
IUUC-Gma-043076	Glycine max	41.52	1.00e-68	252.00
IUUC-Obr-076175	Oryza brachyantha	65.56	2.00e-108	385.00
IUUC-Oin-079170	Oryza indica	67.98	1.00e-115	408.00
IUUC-Olo-081038	Oryza longistaminata	68.28	4.00e-116	410.00
IUUC-Ppa-095944	Physcomitrella patens	30.92	2.00e-27	115.00
IUUC-Pop-098944	Populus trichocarpa	43.47	6.00e-60	223.00
IUUC-Ppe-101889	Prunus persica	42.55	6.00e-67	246.00
IUUC-Sit-110605	Setaria italica	82.03	3.00e-141	493.00
IUUC-Sly-110837	Solanum lycopersicum	38.39	4.00e-49	187.00
IUUC-Stu-112046	Solanum tuberosum	38.28	4.00e-57	214.00
IUUC-Tca-120917	Theobroma cacao	44.48	7.00e-67	246.00
IUUC-Uma-129528	Ustilago maydis	35.48	4.00e-04	39.70

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence