iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-058286

Ensembl Protein ID

AES72154

UniProt Accession

G7J361; G7J361_MEDTR

Genbank Protein ID

AES72154.1

Protein Name

C3HC4-type RING zinc finger protein

Genbank Nucleotide ID

CM001219

Gene Name

MTR_3g086630

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_3g086630	AES72154	AES72154

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.40e-07	33.4	106	148

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cl+ f   + ++  lpC+H+fh+ Cl kw     + +k+ +CPlCr
   Q: 106  CCVCLSGFeanQ-EVSELPCKHFFHRGCLDKW-----FDNKHSSCPLCR 148
           ********7744.4889***************.....9**********8 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MGLSNFPYAA EGVVPVIVMN TVLSMVLLKN MFRSMLQVVG CTSTTNSSYS PNIMEELEEE 60
QVYSQEISNS RERRVSITQY KFLCYNRSNI ARSSSSCGWT SPMVECCVCL SGFEANQEVS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATTTTCTCTT TATATTTAAT AATAATATCC TCTTCTTCTT TGTTGTAAAC TCCTCTACTC 60
CTCAATTAAC AAGAAACAAA TTAATTGAGA ATTATGGGCC TCTCAAACTT TCCCTATGCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001841--Znf_RING
IPR011016--Znf_RING-CH
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING
SM00744--RINGv

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

mtr:MTR_3g086630

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002995	Amborella trichopoda	42.28	4.00e-29	119.00
IUUC-Aly-005925	Arabidopsis lyrata	46.36	4.00e-31	125.00
IUUC-Ath-007262	Arabidopsis thaliana	47.68	1.00e-26	111.00
IUUC-Bol-016497	Brassica oleracea	47.02	7.00e-24	102.00
IUUC-Bra-018002	Brassica rapa	43.71	1.00e-24	104.00
IUUC-Gma-042813	Glycine max	62.50	1.00e-45	174.00
IUUC-Hvu-047116	Hordeum vulgare	57.78	5.00e-13	65.90
IUUC-Oba-075151	Oryza barthii	60.98	6.00e-12	62.80
IUUC-Ogu-078543	Oryza glumaepatula	57.50	8.00e-11	58.90
IUUC-Oni-082979	Oryza nivara	59.52	4.00e-12	63.50
IUUC-Oru-084186	Oryza rufipogon	57.50	7.00e-11	59.30
IUUC-Pop-099106	Populus trichocarpa	57.05	7.00e-40	155.00
IUUC-Ppe-101551	Prunus persica	58.17	3.00e-44	169.00
IUUC-Smo-109622	Selaginella moellendorffii	30.26	1.00e-16	77.40
IUUC-Sit-110545	Setaria italica	57.14	6.00e-12	63.90

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence