iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017094

Ensembl Protein ID

Bra038307.1-P

UniProt Accession

M4FB41; M4FB41_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra038307	Bra038307.1	Bra038307.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.60e-11	43.0	168	203

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvl 35
           H +  t++ +  d + ++s + D++ik WD+r+g +
   Q: 168  HDGIATSVLYsLDkGEVISTGLDKKIKFWDTRRGQS 203
           566667776776668999*************99875 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MLLPLHTRHQ HGSYDKFPAS QSFKAVNINF AAVSSSSESS STTIIQVRGG AEIMESDTFV 60
LAKLQNTFSS RVSRDMSGAR LEFQNPIEDS ISKLKFSPES NNLLIASWDS YLRLYNVESS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCTTCTTC CTCTTCACAC ACGGCATCAA CATGGCTCAT ATGATAAGTT TCCAGCCAGT 60
CAAAGCTTCA AAGCAGTAAA TATTAACTTT GCTGCCGTTT CATCATCCTC TGAGTCATCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001094	Aegilops tauschii	43.69	2.00e-65	241.00
IUUC-Atr-002604	Amborella trichopoda	48.52	1.00e-81	295.00
IUUC-Aly-006482	Arabidopsis lyrata	81.46	7.00e-143	499.00
IUUC-Ath-007619	Arabidopsis thaliana	80.53	1.00e-142	498.00
IUUC-Bdi-014018	Brachypodium distachyon	43.81	4.00e-73	267.00
IUUC-Bol-016156	Brassica oleracea	96.26	0.00e+00	643.00
IUUC-Gma-043264	Glycine max	50.50	1.00e-89	322.00
IUUC-Lpe-051057	Leersia perrieri	43.56	2.00e-68	251.00
IUUC-Mtr-058179	Medicago truncatula	51.03	5.00e-87	313.00
IUUC-Mac-064581	Musa acuminata	47.23	1.00e-75	276.00
IUUC-Oba-075790	Oryza barthii	44.52	1.00e-67	249.00
IUUC-Obr-076040	Oryza brachyantha	45.67	1.00e-69	256.00
IUUC-Ogu-079013	Oryza glumaepatula	39.88	2.00e-64	238.00
IUUC-Oin-080034	Oryza indica	44.52	2.00e-67	249.00
IUUC-Olo-080445	Oryza longistaminata	37.67	1.00e-54	207.00
IUUC-Ome-081933	Oryza meridionalis	39.88	3.00e-65	241.00
IUUC-Oni-082305	Oryza nivara	44.52	1.00e-67	249.00
IUUC-Opu-083254	Oryza punctata	40.48	8.00e-58	216.00
IUUC-Oru-085161	Oryza rufipogon	44.52	1.00e-67	249.00
IUUC-Pop-099762	Populus trichocarpa	54.28	7.00e-96	343.00
IUUC-Ppe-101222	Prunus persica	49.79	3.00e-57	214.00
IUUC-Sit-110260	Setaria italica	42.11	1.00e-63	236.00
IUUC-Stu-112000	Solanum tuberosum	45.36	3.00e-76	278.00
IUUC-Sbi-114097	Sorghum bicolor	42.12	3.00e-67	248.00
IUUC-Tca-121403	Theobroma cacao	57.28	1.00e-98	353.00
IUUC-Tae-122702	Triticum aestivum	45.36	2.00e-67	248.00
IUUC-Tur-126104	Triticum urartu	42.81	8.00e-69	253.00
IUUC-Vvi-131179	Vitis vinifera	51.16	1.00e-87	316.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence