iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114097

UUCD1 version

UUC-SoB-00283

Ensembl Protein ID

Sb01g007510.1

UniProt Accession

A0A1B6QHV6; A0A1B6QHV6_SORBI

Genbank Protein ID

KXG37508.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000760

Gene Name

SORBI_001G083300

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb01g007510	Sb01g007510.1	Sb01g007510.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.80e-14	51.9	92	125

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtg 33
           H+d   c++f s  + + +G+ D++ik+WDl+t 
   Q: 92   HEDVLACIEFsSMtGQVMTGGLDKKIKLWDLKTR 125
           999999****977899**************9875 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MARRSLAGDA TAGAASRVRF APTSNNLLVS SWDSGLRLYD ADEGTLRVSA ESEAALLDCC 60
FEDESSAFAC GSDGSVRRYD FHSGSQDTVG LHEDVLACIE FSSMTGQVMT GGLDKKIKLW 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGAGGC GGAGCCTGGC GGGCGACGCA ACCGCAGGCG CCGCATCCCG GGTTCGGTTC 60
GCGCCCACCT CCAACAACCT GCTCGTCTCC TCATGGGATT CGGTGAGCGC ACTCAGGTCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001094	Aegilops tauschii	63.51	7.00e-108	382.00
IUUC-Aly-006482	Arabidopsis lyrata	43.42	2.00e-68	251.00
IUUC-Ath-007619	Arabidopsis thaliana	44.70	3.00e-69	254.00
IUUC-Bdi-014018	Brachypodium distachyon	64.20	2.00e-121	427.00
IUUC-Bol-016156	Brassica oleracea	42.43	1.00e-69	255.00
IUUC-Bra-017094	Brassica rapa	42.12	3.00e-67	248.00
IUUC-Gma-043687	Glycine max	46.82	7.00e-76	276.00
IUUC-Lpe-051057	Leersia perrieri	63.69	3.00e-116	410.00
IUUC-Mtr-058179	Medicago truncatula	48.00	8.00e-80	289.00
IUUC-Mac-064581	Musa acuminata	49.53	1.00e-89	321.00
IUUC-Oba-075790	Oryza barthii	65.44	6.00e-119	419.00
IUUC-Obr-076040	Oryza brachyantha	67.67	9.00e-122	428.00
IUUC-Ogu-079013	Oryza glumaepatula	57.57	4.00e-113	400.00
IUUC-Oin-080034	Oryza indica	67.38	4.00e-115	407.00
IUUC-Olo-080445	Oryza longistaminata	57.00	2.00e-94	338.00
IUUC-Ome-081933	Oryza meridionalis	58.16	1.00e-114	405.00
IUUC-Oni-082305	Oryza nivara	65.44	3.00e-119	420.00
IUUC-Opu-083254	Oryza punctata	58.90	4.00e-106	377.00
IUUC-Oru-085161	Oryza rufipogon	65.44	3.00e-119	420.00
IUUC-Pop-099762	Populus trichocarpa	47.60	1.00e-72	265.00
IUUC-Ppe-101222	Prunus persica	48.48	1.00e-44	171.00
IUUC-Sit-110260	Setaria italica	71.38	1.00e-121	428.00
IUUC-Stu-112000	Solanum tuberosum	44.26	3.00e-70	257.00
IUUC-Tca-121403	Theobroma cacao	48.85	2.00e-79	288.00
IUUC-Tae-124814	Triticum aestivum	64.00	7.00e-115	405.00
IUUC-Tur-126104	Triticum urartu	65.62	2.00e-114	404.00
IUUC-Vvi-131179	Vitis vinifera	45.10	1.00e-72	265.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence