iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ppa-095960

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Predicted protein

Genbank Nucleotide ID

DS545235

Gene Name

PHYPADRAFT_198983

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S347_35V6	PP1S347_35V6.1	PP1S347_35V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.20e-23	82.9	363	390

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 5    svtclaf.sd..tllvsGsdDgtikvWD 29
           +++++++  d  +l++s+sdDgt+++WD
   Q: 363  RIWSIDYsKDfpNLIASASDDGTVRIWD 390
           6999999955559*************** PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MHDSLGSSLD RLCRFSFRKT LFKFDSTGSR FKRRKVSLEE QSTGAISPPH SIKLKILGVD 60
TLDPHDEKKA AQQISIWTVD RAPTHAILSN GSKGHRNFSE RAKVFEFPML PGTSPPPGDA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAGGGTGTCC GGGCAGATTG TATTTTCAAC CGTGGTATGG AAAGTCCTCT CCTACTCGGT 60
GTATGTAGCC TTTCTTCCAT CTCCTCATTT TCTTTATAGC AATGATGCAA TTACTTCTCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

ppp:PHYPADRAFT_198983

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bol-015816	Brassica oleracea	36.89	1.00e-58	219.00
IUUC-Ppe-102088	Prunus persica	35.55	1.00e-59	222.00
IUUC-Sly-111536	Solanum lycopersicum	36.26	2.00e-65	241.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence