iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gma-042846

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM000840

Gene Name

LOC100794340; GLYMA_07G106000

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA07G11960	GLYMA07G11960.1	GLYMA07G11960.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	5.90e-33	114.4	27	99

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           +p +f+CpIsl+lM+dPv+l++Gitydr+s+e+w+++g+ tcPvt+q +++ d++Pn++lr +iq+wc en++
   Q: 27   IPNHFRCPISLDLMKDPVTLSTGITYDRESVERWFDEGNITCPVTNQVVRNFDMIPNHSLRIMIQDWCVENRQ 99
           799******************************************************************9975 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MVLGWRRRKG CNNNRRKGGK SITELVIPNH FRCPISLDLM KDPVTLSTGI TYDRESVERW 60
FDEGNITCPV TNQVVRNFDM IPNHSLRIMI QDWCVENRQH GVERIPTPRI PISPNEVAEL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGTGTTGG GGTGGAGGAG AAGGAAGGGC TGCAACAATA ACCGCCGAAA AGGTGGCAAA 60
TCCATCACGG AGTTGGTGAT TCCCAACCAC TTCAGGTGTC CAATTTCCCT TGACTTGATG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

gmx:100794340

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003111	Amborella trichopoda	47.05	5.00e-98	351.00
IUUC-Mtr-057926	Medicago truncatula	77.70	2.00e-177	614.00
IUUC-Oin-079622	Oryza indica	45.22	1.00e-93	337.00
IUUC-Opu-084061	Oryza punctata	45.56	2.00e-90	326.00
IUUC-Pop-099237	Populus trichocarpa	61.71	7.00e-127	447.00
IUUC-Ppe-102046	Prunus persica	63.70	5.00e-151	527.00
IUUC-Sit-109976	Setaria italica	46.60	5.00e-95	341.00
IUUC-Sbi-114336	Sorghum bicolor	44.47	5.00e-65	241.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence